RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ANXA13P27216 316 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 SLC5A3P53794 718 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 UBE3AQ05086 875 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 FAM183BPQ6ZVS7 135 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 SPPL2BQ8TCT7 592 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 C18orf8Q96DM3 657 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 TRIM7Q9C029 511 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 PLXNA3P51805 1871 aa16.23■□□□□ 0.19
PDLIM5-202ENST00000318007 EPCAMP16422 314 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 CDH5P33151 784 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 NOP2P46087 812 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 PLA2G4AP47712 749 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 NRIP1P48552 1158 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 USP46P62068 366 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 PTP4A2Q12974 167 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 RAB33AQ14088 237 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 FAM102AQ5T9C2 384 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 SIX6OS1Q8N1H7 587 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 EMC1Q8N766 993 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 KIAA1524Q8TCG1 905 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 TTYH1Q9H313 450 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 GOLPH3Q9H4A6 298 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 AFF4Q9UHB7 1163 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 SSX2IPQ9Y2D8 614 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 ANKRD62A6NC57 917 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 HHLA1C9JL84 531 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 PAPSS1O43252 624 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 ABLIM3O94929 683 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 GLUD1P00367 558 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 TWF1Q12792 350 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 KIF5AQ12840 1032 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 HS1BP3Q53T59 392 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 XYLT1Q86Y38 959 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 MICALL1Q8N3F8 863 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 FAM149B1Q96BN6 582 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 FUBP3Q96I24 572 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 MCEEQ96PE7 176 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 ULBP1Q9BZM6 244 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 RXFP1Q9HBX9 757 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 FNIP2Q9P278 1114 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
PDLIM5-202ENST00000318007 ATG2AQ2TAZ0 1938 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 FSCN2O14926 492 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 RFPL2O75678 378 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 CLCN4P51793 760 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 RPL7AP62424 266 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 GRIN2CQ14957 1233 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 DAB2IPQ5VWQ8 1189 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 PHF13Q86YI8 300 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 NUP85Q9BW27 656 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 CSNK1G1Q9HCP0 422 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 LUC7LQ9NQ29 371 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 COG5Q9UP83 839 aa16.21■□□□□ 0.19
PDLIM5-202ENST00000318007 TMEM110-MUSTN1A8MSY1 372 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 MOCS3O95396 460 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 C8AP07357 584 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 GPC5P78333 572 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 REXO1L1PQ8IX06 675 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 KREMEN2Q8NCW0 462 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 SLC35G2Q8TBE7 412 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 SLC22A17Q8WUG5 538 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 APOL5Q9BWW9 433 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 OXCT2Q9BYC2 517 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 TLE6Q9H808 572 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 MAN1C1Q9NR34 630 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 HYOU1Q9Y4L1 999 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 IRAK3Q9Y616 596 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 TRIM66O15016 1216 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 CALB1P05937 261 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 IGFBP4P22692 258 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 ARHGAP25P42331 645 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 ALDH1A3P47895 512 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 PGFP49763 221 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 CREMQ03060 361 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 VSTM1Q6UX27 236 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 DENND5BQ6ZUT9 1274 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 HFE2Q6ZVN8 426 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 MSANTD4Q8NCY6 345 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 JOSD2Q8TAC2 188 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 SELENOOQ9BVL4 669 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 NUDT5Q9UKK9 219 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 INSL5Q9Y5Q6 135 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 HCFC2Q9Y5Z7 792 aa16.2■□□□□ 0.18
PDLIM5-202ENST00000318007 CCL16O15467 120 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms