RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 DENND5BQ6ZUT9 1274 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 NELFCDQ8IXH7 590 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CAMKK1Q8N5S9 505 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 TTC16Q8NEE8 873 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 OR6B3Q8NGW1 331 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ATP2A3Q93084 1043 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CCDC127Q96BQ5 260 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CHFRQ96EP1 664 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PCED1BQ96HM7 432 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CGRRF1Q99675 332 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 MRPL45Q9BRJ2 306 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 RTKNQ9BST9 563 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 BLZF1Q9H2G9 400 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 LINC00597Q9H2U6 94 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 ECT2Q9H8V3 914 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 FBRSL1Q9HCM7 1045 aaKnown RBP8.69□□□□□ -1.02
TPM3-203ENST00000312970 SLC39A2Q9NP94 309 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CRTAC1Q9NQ79 661 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 SEMA4GQ9NTN9 838 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 TRPM5Q9NZQ8 1165 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 GCNT4Q9P109 453 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 CFAP45Q9UL16 551 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 PCDHA7Q9UN72 937 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 UBE4BO95155 1302 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 AKAP13Q12802 2813 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 DMXL2Q8TDJ6 3036 aa8.69□□□□□ -1.02
TPM3-203ENST00000312970 GCN1Q92616 2671 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 SDK1Q7Z5N4 2213 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 FOXD2O60548 495 aaPredicted RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 EXOC3O60645 756 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 RNF40O75150 1001 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 PHACTR2O75167 634 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 F13A1P00488 732 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 EGFP01133 1207 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 CASP1P29466 404 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 HOXC13P31276 330 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 ATICP31939 592 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 AFMP43652 599 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 TNNC1P63316 161 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 NOP14P78316 857 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 CUL4BQ13620 913 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 CSRP2Q16527 193 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 QPCTQ16769 361 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 BMT2Q1RMZ1 405 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 EML3Q32P44 896 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 MDH1BQ5I0G3 518 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 TDRD10Q5VZ19 366 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 PKN3Q6P5Z2 889 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 CACNA2D4Q7Z3S7 1137 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 HSCBQ8IWL3 235 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 C12orf56Q8IXR9 622 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 CEP57L1Q8IYX8 460 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 CCDC26Q8TAB7 109 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 SH3RF2Q8TEC5 729 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 GAB3Q8WWW8 586 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 CD101Q93033 1021 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 MYLPFQ96A32 169 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 SYAP1Q96A49 352 aaPredicted RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 C8orf48Q96LL4 319 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 RCOR1Q9UKL0 485 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 ARHGAP26Q9UNA1 814 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 WNT6Q9Y6F9 365 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.68□□□□□ -1.02
TPM3-203ENST00000312970 GREB1Q4ZG55 1949 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 IGF2RP11717 2491 aa8.68□□□□□ -1.02
TPM3-203ENST00000312970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 ZNF840PA6NDX5 716 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 A8MXQ7 604 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 F8VP50 259 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 AXIN1O15169 862 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 OBSL1O75147 1896 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 RPP40O75818 363 aaKnown RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 ABL1P00519 1130 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 SLFN14P0C7P3 912 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 ZNF16P17020 682 aaPredicted RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 PXNP49023 591 aaPredicted RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 AP3M2P53677 418 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 MYL6P60660 151 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 USP46P62068 366 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 SLC7A9P82251 487 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 USP4Q13107 963 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 PSMD2Q13200 908 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 PPM1JQ5JR12 505 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 ADGRG2Q8IZP9 1017 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 KIAA1958Q8N8K9 716 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 GOLGA5Q8TBA6 731 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 NETO1Q8TDF5 533 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 LOXL4Q96JB6 756 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 SLITRK1Q96PX8 696 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms