RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 A0A087X0T9 212 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 TBX10O75333 385 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 LRG1P02750 347 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 FAM228BP0C875 321 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 CSH1P0DML2 217 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 CSH2P0DML3 217 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 GZMAP12544 262 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 MMP8P22894 467 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 RGS7P49802 495 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 KIF11P52732 1056 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 USP46P62068 366 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 VEPH1Q14D04 833 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 PTPN20Q4JDL3 420 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 CPXM1Q96SM3 734 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 S1PR5Q9H228 398 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 PTPRDP23468 1912 aa13.34□□□□□ -0.27
CHMP2A-201ENST00000312547 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 CCL16O15467 120 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 XYLBO75191 536 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 ACADSBP45954 432 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 GABRB2P47870 512 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 EPHA5P54756 1037 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 PTP4A2Q12974 167 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 SLC18A3Q16572 532 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 GPR149Q86SP6 731 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 PHF13Q86YI8 300 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 SCML4Q8N228 414 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 SCAMP5Q8TAC9 235 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 ZNF512Q96ME7 567 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 ISCUQ9H1K1 167 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 LRRC4Q9HBW1 653 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 TJP2Q9UDY2 1190 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
CHMP2A-201ENST00000312547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 E5RJQ4 531 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 ERBB2P04626 1255 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 TKTL1P51854 596 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 PPP1R2P3Q6NXS1 205 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 ST7Q9NRC1 585 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 EHD2Q9NZN4 543 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 SCML2Q9UQR0 700 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 NCANO14594 1321 aa13.32□□□□□ -0.28
CHMP2A-201ENST00000312547 SOWAHDA6NJG2 315 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ZNF263O14978 683 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 AKR1B10O60218 316 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 RTN2O75298 545 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 FBXO21O94952 628 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 LCA5LO95447 670 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ZBED1O96006 694 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms