RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TKFCQ3LXA3 575 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 DHDDSQ86SQ9 333 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 GDPD5Q8WTR4 605 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 C20orf27Q9GZN8 174 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 S100A14Q9HCY8 104 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ADAMTSL1Q8N6G6 1762 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 LOC100653049A0A140TA62 436 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ZNF862O60290 1169 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 KRT34O76011 436 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ACO1P21399 889 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 NLRP11P59045 1033 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 PEX6Q13608 980 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 TRIM72Q6ZMU5 477 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 DENND5BQ6ZUT9 1274 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 SLC44A1Q8WWI5 657 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 DDX18Q9NVP1 670 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 PACSIN3Q9UKS6 424 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 UGT1A9O60656 530 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 PFDN1O60925 122 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 PSMA2P25787 234 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 INHBCP55103 352 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 SMAD1Q15797 465 aaKnown RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 EFHC1Q5JVL4 640 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 TCHHL1Q5QJ38 904 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 RABGAP1LQ5R372 815 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ATG16L1Q676U5 607 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ACAD11Q709F0 780 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 LRRN4Q8WUT4 740 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL6A2-202ENST00000310645 UGT1A7Q9HAW7 530 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 UGT1A10Q9HAW8 530 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 UGT1A8Q9HAW9 530 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 ADAMTS6Q9UKP5 1117 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 CCPG1Q9ULG6 757 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 NUB1Q9Y5A7 615 aa15.3■□□□□ 0.04
COL6A2-202ENST00000310645 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 RBP3P10745 1247 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 VCLP18206 1134 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 ZC3H12AQ5D1E8 599 aaKnown RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 RSPH3Q86UC2 560 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 HSPH1Q92598 858 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 GCNAQ96QF7 691 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 CNTN3Q9P232 1028 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 MAP3K6O95382 1288 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 VNN1O95497 513 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 MMP8P22894 467 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 RNF111Q6ZNA4 994 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 PDSS2Q86YH6 399 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 CHURC1Q8WUH1 139 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 VCPIP1Q96JH7 1222 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 A0A088AWK7 358 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-202ENST00000310645 SLC18A2Q05940 514 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 ZACNQ401N2 412 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 EMC1Q8N766 993 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 FAM172AQ8WUF8 416 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 KLHL4Q9C0H6 718 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 SLC4A7Q9Y6M7 1214 aa15.29■□□□□ 0.04
COL6A2-202ENST00000310645 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL6A2-202ENST00000310645 FKBP6O75344 327 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 ZMPSTE24O75844 475 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 PROCP04070 461 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 FAM200BP0CF97 657 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 UQCRBP14927 111 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 ATP6V1B1P15313 513 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 DPYSL3Q14195 570 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 PDK3Q15120 406 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 DARS2Q6PI48 645 aaKnown RBP15.28■□□□□ 0.04
COL6A2-202ENST00000310645 NPNTQ6UXI9 565 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 ANO5Q75V66 913 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 TRIM74Q86UV6 250 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 TRIM73Q86UV7 250 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 NDUFAF2Q8N183 169 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 FAF2Q96CS3 445 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 CHCHD3Q9NX63 227 aaKnown RBP15.28■□□□□ 0.04
COL6A2-202ENST00000310645 IL1RAPL1Q9NZN1 696 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 FETUBQ9UGM5 382 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 KRT37O76014 449 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 IL1R2P27930 398 aa15.28■□□□□ 0.04
COL6A2-202ENST00000310645 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
COL6A2-202ENST00000310645 RFC1P35251 1148 aaPredicted RBP15.28■□□□□ 0.04
COL6A2-202ENST00000310645 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms