RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SEPT1Q8WYJ6 367 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 TMEM121Q9BTD3 319 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 IL1RL2Q9HB29 575 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 CD274Q9NZQ7 290 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 PCDHA3Q9Y5H8 950 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 RALBP11234 206 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 MAGED4Q96JG8 741 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 TBL3Q12788 808 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 Q4G0T1 1027 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 LPCAT2Q7L5N7 544 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 TMEM51Q9NW97 253 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 PKP3Q9Y446 797 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 SNX13Q9Y5W8 968 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 C21orf2O43822 256 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 LZTS3O60299 673 aaPredicted RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 GSNP06396 782 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 OASLQ15646 514 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 CHORDC1Q9UHD1 332 aaPredicted RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 MED24O75448 989 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 RRM1P23921 792 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 RPL21P46778 160 aaKnown RBP13.62□□□□□ -0.23
SNED1-201ENST00000310397 ZBTB49Q6ZSB9 765 aa13.62□□□□□ -0.23
SNED1-201ENST00000310397 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ADGRB1O14514 1584 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 MYL3P08590 195 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 LATS2Q9NRM7 1088 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 DIP2CQ9Y2E4 1556 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ITGA4P13612 1032 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 DRG2P55039 364 aaKnown RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 RPS6P62753 249 aaKnown RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 ACTL7BQ9Y614 415 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ZSCAN5CA6NGD5 496 aaPredicted RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 GRIK1P39086 918 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ELF3P78545 371 aaPredicted RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 EPC2Q52LR7 807 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PRMT9Q6P2P2 845 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 RAB42Q8N4Z0 105 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 IPMKQ8NFU5 416 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 SORCS3Q9UPU3 1222 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 C19orf81C9J6K1 198 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ILF2Q12905 390 aaKnown RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 BAATQ14032 418 aaPredicted RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PDPK2PQ6A1A2 396 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 SLC7A14Q8TBB6 771 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNED1-201ENST00000310397 RARBP10826 455 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PNPLA4P41247 253 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 POU4F1Q01851 419 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 CLEC16AQ2KHT3 1053 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 SWT1Q5T5J6 900 aaKnown RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 LAYNQ6UX15 382 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 TMEM79Q9BSE2 394 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 VTI1BQ9UEU0 232 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 NR3C2P08235 984 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PKN1Q16512 942 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PLEKHA7Q6IQ23 1121 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 KDELC2Q7Z4H8 507 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 SPATA2LQ8IUW3 424 aaPredicted RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 BBS7Q8IWZ6 715 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 B4GALNT2Q8NHY0 566 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
SNED1-201ENST00000310397 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
SNED1-201ENST00000310397 PRR23D1E9PI22 279 aaPredicted RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PRR23D2P0DMB1 279 aaPredicted RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 ZNF23P17027 643 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 NAMPTP43490 491 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 GOLGA7BQ2TAP0 167 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 ZNF398Q8TD17 642 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 SHCBP1LQ9BZQ2 653 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PYGMP11217 842 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 TDRD5Q8NAT2 981 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 APOPT1Q96IL0 206 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 AFF4Q9UHB7 1163 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 MAGEB16A2A368 324 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 IYDQ6PHW0 289 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 ELMOD1Q8N336 334 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 ZNF75CPQ92670 426 aaPredicted RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 TUBGCP3Q96CW5 907 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PABPC5Q96DU9 382 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 BDH2Q9BUT1 245 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 NCAM2O15394 837 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 RGS2P41220 211 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 NR2C2P49116 596 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 SLC22A9Q8IVM8 553 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms