RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 EFCAB8A8MWE9 144 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MIF4GDA9UHW6 222 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 NT5C1B-RDH14C9J2C7 533 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DYNC1I1O14576 645 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 XPO1O14980 1071 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PAPSS1O43252 624 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 GALTP07902 379 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTAGE8P0CG41 777 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 KRT3P12035 628 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TCF4P15884 667 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 NPR3P17342 541 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RFC1P35251 1148 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TAS2R40P59535 323 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RNASE9P60153 205 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 WDR5P61964 334 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PLCB3Q01970 1234 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF211Q13398 564 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TAF5Q15542 800 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ERCC6LQ2NKX8 1250 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 FAM102AQ5T9C2 384 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 OR6B2Q6IFH4 312 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 AADACL2Q6P093 401 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DCUN1D2Q6PH85 259 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 OLFML1Q6UWY5 402 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTAGE6Q86UF2 777 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTAGE4Q8IX94 777 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 LRRC43Q8N309 656 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RASGEF1CQ8N431 466 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 NOA1Q8NC60 698 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ZMIZ2Q8NF64 920 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MYCBPAPQ8TBZ2 947 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 KHSRPQ92945 711 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TOP1MTQ969P6 601 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MYLPFQ96A32 169 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 SMOQ99835 787 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MED10Q9BTT4 135 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DNAI2Q9GZS0 605 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CWH43Q9H720 699 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RC3H2Q9HBD1 1191 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 USP9XQ93008 2570 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF292O60281 2723 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 F8VP50 259 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CEP104O60308 925 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TADA2AO75478 443 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 GRAP2O75791 330 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 LCP1P13796 627 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 MAN1A1P33908 653 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 SLC1A1P43005 524 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 PTPN5P54829 565 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 MAP3K7CLP57077 242 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TAP1Q03518 808 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 YWHAHQ04917 246 aaPredicted RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CKAP4Q07065 602 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 C2orf54Q08AI8 447 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ELF2Q15723 593 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TEX35Q5T0J7 233 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FUT10Q6P4F1 479 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 C16orf59Q7L2K0 433 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 PIGZQ86VD9 579 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 SCUBE3Q8IX30 993 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM199Q8N511 208 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ARFGAP1Q8N6T3 406 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 NIPA2Q8N8Q9 360 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF689Q96CS4 500 aaPredicted RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 B3GALT6Q96L58 329 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM175Q9BSA9 504 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 IP6K2Q9UHH9 426 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 USTQ9Y2C2 406 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FAN1Q9Y2M0 1017 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 PCDHA3Q9Y5H8 950 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 RANBP2P49792 3224 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ARHGEF37A1IGU5 675 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 HHLA1C9JL84 531 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 AP1G2O75843 785 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 OAZ2O95190 189 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ALDH2P05091 517 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 OR4Q2P0C623 313 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FAM200BP0CF97 657 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 PYGMP11217 842 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 PSMA2P25787 234 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FLT3P36888 993 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 SLC6A3Q01959 620 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 MRPL58Q14197 206 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CFAP221Q4G0U5 840 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 RAB6CQ53S08 254 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
PTCD2-201ENST00000308077 CCDC181Q5TID7 509 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FAM171A1Q5VUB5 890 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 GPRIN1Q7Z2K8 1008 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 THEM5Q8N1Q8 247 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 UBL4BQ8N7F7 174 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 SPATA4Q8NEY3 305 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 ACTRT1Q8TDG2 376 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 FNIP1Q8TF40 1166 aa7.32□□□□□ -1.24
PTCD2-201ENST00000308077 NDRG1Q92597 394 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms