RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ASGR2P07307 311 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ALADP13716 330 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KLK7P49862 253 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 BPIFB4P59827 614 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 POLR2FP61218 127 aaKnown RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 USP46P62068 366 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TAF10Q12962 218 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 HTR4Q13639 388 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DRAP1Q14919 205 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CNGA2Q16280 664 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 STXBP5Q5T5C0 1151 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LCLAT1Q6UWP7 414 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SMARCD2Q92925 531 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ASB16Q96NS5 453 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LRRC4Q9HBW1 653 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 AJAP1Q9UKB5 411 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CNTN6Q9UQ52 1028 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ANHXE9PGG2 379 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DLL1O00548 723 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CKMP06732 381 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PFKLP17858 780 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZNF445P59923 1031 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FANCCQ00597 558 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PDE4CQ08493 712 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TDGQ13569 410 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FAM78AQ5JUQ0 283 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TXNDC8Q6A555 127 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PARM1Q6UWI2 310 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 APTXQ7Z2E3 356 aaKnown RBP11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PIGZQ86VD9 579 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UBALD2Q8IYN6 164 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SCAMP5Q8TAC9 235 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TFAP2BQ92481 460 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FGF14Q92915 247 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 STK33Q9BYT3 514 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NACA2Q9H009 215 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GANQ9H2C0 597 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NLRC4Q9NPP4 1024 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SIK3Q9Y2K2 1263 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NCANO14594 1321 aa11.6□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 HHLA1C9JL84 531 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 F8VZ95 297 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CYP26A1O43174 497 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ECI2O75521 394 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CALCAP01258 141 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 USP17L7P0C7H9 530 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KRT9P35527 623 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 STAT1P42224 750 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UBASH3AP57075 661 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MEA1Q16626 185 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TMEM150AQ86TG1 271 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MON1AQ86VX9 555 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FMNL3Q8IVF7 1028 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ARHGAP18Q8N392 663 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 RNF214Q8ND24 703 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ST13P5Q8NFI4 369 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DEPDC1BQ8WUY9 529 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZNF606Q8WXB4 792 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 RSAD2Q8WXG1 361 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GMIPQ9P107 970 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DUSP12Q9UNI6 340 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SCML2Q9UQR0 700 aa11.59□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FAM92AA1XBS5 289 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF840PA6NDX5 716 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 HEPACAM2A8MVW5 462 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TEX33O43247 280 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms