RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SERPINB3P29508 390 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ATP5DP30049 168 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 CDK7P50613 346 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TCP10Q12799 353 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SLC10A2Q12908 348 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 MYBPC3Q14896 1274 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SUPT20HL1Q3ZLR7 823 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 OGFRL1Q5TC84 451 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 C8orf82Q6P1X6 216 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 SPOCD1Q6ZMY3 1216 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CATSPERGQ6ZRH7 1159 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 KBTBD6Q86V97 674 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 RCOR2Q8IZ40 523 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 C4orf33Q8N1A6 199 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ANKRD42Q8N9B4 389 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 APBB2Q92870 758 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ZNF653Q96CK0 615 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NLRP4Q96MN2 994 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NT5C1BQ96P26 610 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 RAB3IPQ96QF0 476 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 TAAR1Q96RJ0 339 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PI4K2AQ9BTU6 479 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 GLIS2Q9BZE0 524 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 FAM192AQ9GZU8 254 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 XYLT2Q9H1B5 865 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 EBF3Q9H4W6 596 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PCDH9Q9HC56 1237 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CYP26B1Q9NR63 512 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SENP1Q9P0U3 644 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 KIAA1522Q9P206 1035 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 TBK1Q9UHD2 729 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CCPG1Q9ULG6 757 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS50-202ENST00000305866 SCINQ9Y6U3 715 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SHROOM3Q8TF72 1996 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 A8MXQ7 604 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ZBTB42B2RXF5 422 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NVLO15381 856 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 DENRO43583 198 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 MARCH6O60337 910 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 DCTN3O75935 186 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ASS1P00966 412 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 KRT10P13645 584 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SSTR1P30872 391 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ZNF76P36508 570 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 RPS6P62753 249 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 NFX1Q12986 1120 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 RCN1Q15293 331 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 XKR3Q5GH77 459 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SEL1L2Q5TEA6 688 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SLC30A9Q6PML9 568 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 BNIPLQ7Z465 357 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 WDR49Q8IV35 697 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CMASQ8NFW8 434 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 EZH1Q92800 747 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 ATP6V0A1Q93050 837 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CLPTM1LQ96KA5 538 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TMEM120AQ9BXJ8 343 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TMX4Q9H1E5 349 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 ASCC2Q9H1I8 757 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 ZWILCHQ9H900 591 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NUB1Q9Y5A7 615 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NME7Q9Y5B8 376 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PLXNA3P51805 1871 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 F8VP50 259 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DLGAP1O14490 977 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ALDH1A2O94788 518 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CFBP00751 764 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PSAPP07602 524 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 FGF3P11487 239 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 HOXD8P13378 290 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 KRT4P19013 534 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 IBSPP21815 317 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 RPL22P35268 128 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 BACE1P56817 501 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 GEMIN4P57678 1058 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 PLOD1Q02809 727 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 KLC1Q07866 573 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DBN1Q16643 649 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MBLAC2Q68D91 279 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ELMSAN1Q6PJG2 1045 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TIFABQ6ZNK6 161 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PHLDB2Q86SQ0 1253 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TMEM130Q8N3G9 435 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CHST13Q8NET6 341 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZNF526Q8TF50 670 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 TFAP2BQ92481 460 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 FAF2Q96CS3 445 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PCYT2Q99447 389 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZNF184Q99676 751 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 ECSITQ9BQ95 431 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MYOZ2Q9NPC6 264 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TMOD2Q9NZR1 351 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZNF180Q9UJW8 692 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ANAPC7Q9UJX3 599 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 USP3Q9Y6I4 520 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 EVPLQ92817 2033 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms