RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ASPHQ12797 758 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 PRPF39Q86UA1 669 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 ZNF677Q86XU0 584 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
SDC2-201ENST00000302190 MBOAT7Q96N66 472 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 MECRQ9BV79 373 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SNX25Q9H3E2 840 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 SLC17A7Q9P2U7 560 aa14.64□□□□□ -0.07
SDC2-201ENST00000302190 VTNP04004 478 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 GSTA1P08263 222 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 TCN1P20061 433 aaPredicted RBP14.63□□□□□ -0.07
SDC2-201ENST00000302190 GAD2Q05329 585 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 DPP9Q86TI2 863 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 RNF135Q8IUD6 432 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 JOSD2Q8TAC2 188 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 PGBD4Q96DM1 585 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 TMEM120AQ9BXJ8 343 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 ELP3Q9H9T3 547 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 UBIAD1Q9Y5Z9 338 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 MROH7Q68CQ1 1323 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 NDC80O14777 642 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 NPTXRO95502 500 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 MAPTP10636 758 aaKnown RBP14.63□□□□□ -0.07
SDC2-201ENST00000302190 GLRA2P23416 452 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 FOXN2P32314 431 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 MPP2Q14168 576 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 ZACNQ401N2 412 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 GJC2Q5T442 439 aaPredicted RBP14.63□□□□□ -0.07
SDC2-201ENST00000302190 HACE1Q8IYU2 909 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 KCTD17Q8N5Z5 321 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 EXT2Q93063 718 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 SIPA1L1O43166 1804 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 MEI4A8MW99 385 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 LIASO43766 372 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 LGR5O75473 907 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 FAM155BO75949 473 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 XRCC4Q13426 336 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 MTFR1Q15390 333 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 C16orf46Q6P387 395 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 TRIM74Q86UV6 250 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 TRIM73Q86UV7 250 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 VSIG10LQ86VR7 867 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 FAM228AQ86W67 206 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 SCUBE3Q8IX30 993 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 RXFP2Q8WXD0 754 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 DCPSQ96C86 337 aaKnown RBP14.63□□□□□ -0.07
SDC2-201ENST00000302190 ZBED3Q96IU2 234 aaPredicted RBP14.63□□□□□ -0.07
SDC2-201ENST00000302190 GPR88Q9GZN0 384 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 SIK2Q9H0K1 926 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 KLK14Q9P0G3 267 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 TJP2Q9UDY2 1190 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 ADGRA3Q8IWK6 1321 aa14.63□□□□□ -0.07
SDC2-201ENST00000302190 ANKRD33BA6NCL7 494 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 APOL1O14791 398 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 PYGLP06737 847 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 CD48P09326 243 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 TAC1P20366 129 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 AQP5P55064 265 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 KLC1Q07866 573 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 SEPT6Q14141 434 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 LRRC23Q53EV4 343 aaPredicted RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 RWDD4Q6NW29 188 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 CENPTQ96BT3 561 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 GPRASP2Q96D09 838 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 HPDLQ96IR7 371 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 HERPUD2Q9BSE4 406 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 PAPOLBQ9NRJ5 636 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 ZFATQ9P243 1243 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 FAM237BA0A1B0GVD1 139 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 B4GALT5O43286 388 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 MIPP30301 263 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 PHKA2P46019 1235 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 MORF4L2Q15014 288 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 RYBPQ8N488 228 aaPredicted RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 MAB21L3Q8N8X9 362 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 KLHL23Q8NBE8 558 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 E2F7Q96AV8 911 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 MTBPQ96DY7 904 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 ZNF317Q96PQ6 595 aaPredicted RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 CGRRF1Q99675 332 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 SUDS3Q9H7L9 328 aaPredicted RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 CHCHD3Q9NX63 227 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 HTTP42858 3142 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 OGTO15294 1046 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 ZWINTO95229 277 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 PAPOLAP51003 745 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 STX3Q13277 289 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 CUL3Q13618 768 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 TAF5Q15542 800 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 FAM131BQ86XD5 332 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 UNC45BQ8IWX7 931 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 ZCCHC9Q8N567 271 aaKnown RBP14.62□□□□□ -0.07
SDC2-201ENST00000302190 B4GALNT2Q8NHY0 566 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms