RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FASTKD3Q14CZ7 662 aaKnown RBP22.98■■□□□ 1.27
TPM4-201ENST00000300933 GOLGA7BQ2TAP0 167 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 ZNF618Q5T7W0 954 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 PMF1Q6P1K2 205 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 ACTL9Q8TC94 416 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 PEBP4Q96S96 227 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 NT5C1AQ9BXI3 368 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 HOMER3Q9NSC5 361 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 CACNG4Q9UBN1 327 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 C15orf41Q9Y2V0 281 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 C2CD2Q9Y426 696 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 RECQL4O94761 1208 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 VDRP11473 427 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 ITIH4Q14624 930 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 LRRC14Q15048 493 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 FAM183BPQ6ZVS7 135 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 KIF2BQ8N4N8 673 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 KCTD6Q8NC69 237 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 MGARPQ8TDB4 240 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 MIS12Q9H081 205 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 MLXIPLQ9NP71 852 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 SLC5A4Q9NY91 659 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 NINJ2Q9NZG7 142 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 GNEQ9Y223 722 aaKnown RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 A6NJR5 290 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 MAP3K6O95382 1288 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 IGFBP6P24592 240 aaPredicted RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 CCNHP51946 323 aaPredicted RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 OTUD4Q01804 1114 aaKnown RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 TAP1Q03518 808 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 SPDYCQ5MJ68 293 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 LRRC38Q5VT99 294 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 SLC27A1Q6PCB7 646 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 OR6B3Q8NGW1 331 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 MRRFQ96E11 262 aaKnown RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 SPDL1Q96EA4 605 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 CFAP57Q96MR6 1250 aa22.97■■□□□ 1.27
TPM4-201ENST00000300933 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.97■■□□□ 1.27
TPM4-201ENST00000300933 A8MUI8 341 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 PIAS1O75925 651 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 TTC4O95801 387 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 CCDC142Q17RM4 750 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 ZNF410Q86VK4 478 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 NIPA2Q8N8Q9 360 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 RBM15Q96T37 977 aaKnown RBP eCLIP22.96■■□□□ 1.27
TPM4-201ENST00000300933 CYP3A43Q9HB55 503 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 GPATCH2LQ9NWQ4 482 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 STK38LQ9Y2H1 464 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 DIAPH2O60879 1101 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 GSTA1P08263 222 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 KDELR1P24390 212 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 YARSP54577 528 aaKnown RBP22.96■■□□□ 1.27
TPM4-201ENST00000300933 MFSD10Q14728 455 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 SCYL2Q6P3W7 929 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 NPNTQ6UXI9 565 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 TTC30AQ86WT1 665 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 RXFP2Q8WXD0 754 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 USP18Q9UMW8 372 aa22.96■■□□□ 1.27
TPM4-201ENST00000300933 SLC15A5A6NIM6 579 aa22.95■■□□□ 1.27
TPM4-201ENST00000300933 PPP1R12AO14974 1030 aaPredicted RBP22.95■■□□□ 1.27
TPM4-201ENST00000300933 HOXD8P13378 290 aaPredicted RBP22.95■■□□□ 1.27
TPM4-201ENST00000300933 PDGFRAP16234 1089 aa22.95■■□□□ 1.27
TPM4-201ENST00000300933 TAF1CQ15572 869 aaPredicted RBP22.95■■□□□ 1.27
TPM4-201ENST00000300933 C6orf118Q5T5N4 469 aa22.95■■□□□ 1.27
TPM4-201ENST00000300933 SYDE1Q6ZW31 735 aaPredicted RBP22.95■■□□□ 1.27
TPM4-201ENST00000300933 PGM2Q96G03 612 aa22.95■■□□□ 1.27
TPM4-201ENST00000300933 VRTNQ9H8Y1 702 aa22.95■■□□□ 1.27
TPM4-201ENST00000300933 F2P00734 622 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 HMGCRP04035 888 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 PECAM1P16284 738 aaPredicted RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 LMO2P25791 158 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 GCKP35557 465 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 PEX19P40855 299 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 ZNF157P51786 506 aaPredicted RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 SLC8A3P57103 927 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 MAP2K5Q13163 448 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 ZNF268Q14587 947 aaPredicted RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 TRMT10CQ7L0Y3 403 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 RFX6Q8HWS3 928 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 CYP4X1Q8N118 509 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 ALLCQ8N6M5 410 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 DARSP14868 501 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 VCPP55072 806 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 INCA1Q0VD86 236 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 OASLQ15646 514 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 BZW1Q7L1Q6 419 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 CLEC4CQ8WTT0 213 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 MCRS1Q96EZ8 462 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 SNX27Q96L92 541 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 MAGEB5Q9BZ81 275 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 ECT2Q9H8V3 914 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 SAYSD1Q9NPB0 183 aa22.95■■□□□ 1.26
TPM4-201ENST00000300933 DDX56Q9NY93 547 aaKnown RBP22.95■■□□□ 1.26
TPM4-201ENST00000300933 NRCAMQ92823 1304 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 EIF4E1BA6NMX2 242 aaKnown RBP22.94■■□□□ 1.26
TPM4-201ENST00000300933 RNF8O76064 485 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 HADHQ16836 314 aaKnown RBP22.94■■□□□ 1.26
TPM4-201ENST00000300933 EXOC3L1Q86VI1 746 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 MAB21L3Q8N8X9 362 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms