RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ALLCQ8N6M5 410 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 SPATA18Q8TC71 538 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 SLCO2A1Q92959 643 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 MBLAC1A4D2B0 266 aaPredicted RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 I3L4J1 428 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 QPCTQ16769 361 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 C17orf99Q6UX52 265 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 EPN3Q9H201 632 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 RBP3P10745 1247 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 MAGEA4P43358 317 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 KYAT1Q16773 422 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 NBPF20Q3BBV1 942 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 UBXN11Q5T124 520 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 UBQLN1Q9UMX0 589 aaKnown RBP15.26■□□□□ 0.03
SMG8-201ENST00000300917 TCRBV7S3A2A0A539 114 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 C2CD4BA6NLJ0 364 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 H7C0C1 242 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 MLH1P40692 756 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 ATP5OP48047 213 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 ZNF143P52747 638 aaPredicted RBP15.26■□□□□ 0.03
SMG8-201ENST00000300917 PURAQ00577 322 aaKnown RBP15.26■□□□□ 0.03
SMG8-201ENST00000300917 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 NIPA2Q8N8Q9 360 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 HASPINQ8TF76 798 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 ZNF473Q8WTR7 871 aaKnown RBP15.26■□□□□ 0.03
SMG8-201ENST00000300917 ARHGEF2Q92974 986 aaKnown RBP15.26■□□□□ 0.03
SMG8-201ENST00000300917 GAD1Q99259 594 aa15.26■□□□□ 0.03
SMG8-201ENST00000300917 LAMA2P24043 3122 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 UNCXA6NJT0 531 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 SDC4P31431 198 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 PDIA2Q13087 525 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 OASLQ15646 514 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 C6orf118Q5T5N4 469 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 SMG8Q8ND04 991 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 GDAP1Q8TB36 358 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 TLCD1Q96CP7 247 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 TMPRSS4Q9NRS4 437 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 CDY2AQ9Y6F7 541 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 MKI67P46013 3256 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 DNALI1O14645 258 aaPredicted RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 RPS6KA5O75582 802 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 TMED2Q15363 201 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 ZBTB6Q15916 424 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 TRMT10CQ7L0Y3 403 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 SRRM1Q8IYB3 904 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 APPL2Q8NEU8 664 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 CNPY3Q9BT09 278 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 CASTOR2A6NHX0 329 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 WSCD1Q658N2 575 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 SYDE1Q6ZW31 735 aaPredicted RBP15.25■□□□□ 0.03
SMG8-201ENST00000300917 EXOC3L1Q86VI1 746 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 APBA2Q99767 749 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 PAAF1Q9BRP4 392 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
SMG8-201ENST00000300917 HUS1O60921 280 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 ELNP15502 786 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 ADAM17P78536 824 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 RNF187Q5TA31 235 aaPredicted RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 OSTM1Q86WC4 334 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 DYDC1Q8WWB3 177 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 PAIP2Q9BPZ3 127 aaKnown RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 DHX35Q9H5Z1 703 aaKnown RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 ST3GAL5Q9UNP4 418 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 RPL22P35268 128 aaKnown RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 FLT3LGP49771 235 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 NDUFV1P49821 464 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 PITX1P78337 314 aaPredicted RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 BBS9Q3SYG4 887 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 CPLX4Q7Z7G2 160 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 SRLQ86TD4 932 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 ADGRF2Q8IZF7 708 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 TRIB2Q92519 343 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 MED10Q9BTT4 135 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 INTS9Q9NV88 658 aaKnown RBP15.24■□□□□ 0.03
SMG8-201ENST00000300917 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
SMG8-201ENST00000300917 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 BEST1O76090 585 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 TAF6P49848 677 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 LILRA4P59901 499 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 LMNB2Q03252 620 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms