RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CLEC16AQ2KHT3 1053 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 SPATA2LQ8IUW3 424 aaPredicted RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 TPCN2Q8NHX9 752 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 CDK5RAP1Q96SZ6 601 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 THUMPD3Q9BV44 507 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 QTRT2Q9H974 415 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 LIN7AO14910 233 aaPredicted RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 RARBP10826 455 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 PPP3CCP48454 512 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 STOML2Q9UJZ1 356 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 BNIP3LO60238 219 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 GPD1P21695 349 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 CYP4A22Q5TCH4 519 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 CD302Q8IX05 232 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 AP3S1Q92572 193 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 SH3BP4Q9P0V3 963 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 A0A087WWV3 80 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 CYP26A1O43174 497 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 EXTL3O43909 919 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 MPOP05164 745 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 MYL6P60660 151 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 SLC34A1Q06495 639 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 LRRIQ1Q96JM4 1722 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 MYL12AP19105 171 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 RAB25P57735 213 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 KIAA0408Q6ZU52 694 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 TC2NQ8N9U0 490 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 ZBTB10Q96DT7 871 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 ATXN7L3BQ96GX2 97 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 ANKRD12Q6UB98 2062 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 MLH1P40692 756 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 SAMD4BQ5PRF9 694 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 KIF2BQ8N4N8 673 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 RMI1Q9H9A7 625 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 TMBIM4Q9HC24 238 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 DBR1Q9UK59 544 aaKnown RBP11.67□□□□□ -0.54
GCN1-201ENST00000300648 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
GCN1-201ENST00000300648 F8VZ95 297 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 F9P00740 461 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 PABPC1P11940 636 aaKnown RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.542e-7■■■■□ 23.2
GCN1-201ENST00000300648 C21orf59P57076 290 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 RASA2Q15283 850 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 CHMP1BQ7LBR1 199 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 KCNH4Q9UQ05 1017 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 TEX28O15482 410 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 VCLP18206 1134 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 CCNA2P20248 432 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 WDR72Q3MJ13 1102 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 TMEM79Q9BSE2 394 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 FAM49AQ9H0Q0 323 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 TRIM49D1C9J1S8 452 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 PRKAB2O43741 272 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 GNL1P36915 607 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 B3GNT6Q6ZMB0 384 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 SLC13A5Q86YT5 568 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 CYP39A1Q9NYL5 469 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 SNX13Q9Y5W8 968 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 WWP2O00308 870 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 GYPCP04921 128 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ADORA2BP29275 332 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 EXD1Q8NHP7 514 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 PUS3Q9BZE2 481 aaKnown RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 KLHL28Q9NXS3 571 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 C6orf203Q9P0P8 240 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 ROBO2Q9HCK4 1378 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 RGS20O76081 388 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ACCSLQ4AC99 568 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 FEZF2Q8TBJ5 459 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 WWOXQ9NZC7 414 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 CRNNQ9UBG3 495 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 RBP3P10745 1247 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 FCER1AP12319 257 aa11.66□□□□□ -0.54
GCN1-201ENST00000300648 ALOX15P16050 662 aaPredicted RBP11.66□□□□□ -0.54
GCN1-201ENST00000300648 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms