RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 MPZL2O60487 215 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ZBED4O75132 1171 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 PPP2R1BP30154 601 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 SMIM11AP58511 58 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 TRIM65Q6PJ69 517 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 LAYNQ6UX15 382 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 CCDC81Q6ZN84 652 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ANKRD13CQ8N6S4 541 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 TEX47Q8TBZ9 253 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ASAP3Q8TDY4 903 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 PLA2G4AP47712 749 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 GEMIN4P57678 1058 aaKnown RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 IL18R1Q13478 541 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 KRT31Q15323 416 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 SEL1L3Q68CR1 1132 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 MACC1Q6ZN28 852 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 SPATA16Q9BXB7 569 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 FUT8Q9BYC5 575 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 DSN1Q9H410 356 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 RMND5AQ9H871 391 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 POLG2Q9UHN1 485 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 BARX2Q9UMQ3 279 aaPredicted RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 SH3BP1Q9Y3L3 701 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 EML6Q6ZMW3 1958 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 C2orf74A8MZ97 194 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 SRP72O76094 671 aaKnown RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 ENO1P06733 434 aaKnown RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 LIG4P49917 911 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ATP1A4Q13733 1029 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 PTK6Q13882 451 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 STXBP2Q15833 593 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ME3Q16798 604 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 IZUMO2Q6UXV1 221 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 PGAP1Q75T13 922 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 GPALPP1Q8IXQ4 340 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 UBASH3BQ8TF42 649 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ARHGEF26Q96DR7 871 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 LRRC2Q9BYS8 371 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ZC3H12CQ9C0D7 883 aaKnown RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 SLC12A4Q9UP95 1085 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 CLDN25C9JDP6 229 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 OPLAHO14841 1288 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 ATP6V1G1O75348 118 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 POLBP06746 335 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 PRAMEP78395 509 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 HEATR6Q6AI08 1181 aaKnown RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 C18orf25Q96B23 403 aaPredicted RBP5□□□□□ -1.61
CSMD3-201ENST00000297405 CYP4F11Q9HBI6 524 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 AASSQ9UDR5 926 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 MAD2L2Q9UI95 211 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
CSMD3-201ENST00000297405 PHF20L1A8MW92 1017 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 M0QZ92 97 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZBTB5O15062 677 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CYP7A1P22680 504 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ESRP1Q6NXG1 681 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 UBE2J2Q8N2K1 259 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 INO80EQ8NBZ0 244 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 LINC00301Q8NCQ3 95 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ADAM32Q8TC27 787 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ACTRT1Q8TDG2 376 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 KCNV2Q8TDN2 545 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CAPSLQ8WWF8 208 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RBM15Q96T37 977 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 C6orf62Q9GZU0 229 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RACGAP1Q9H0H5 632 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ARHGEF5Q12774 1597 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TRAPPC3O43617 180 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NMT1P30419 496 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TFDP1Q14186 410 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 STILQ15468 1287 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FBXO43Q4G163 708 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF394Q53GI3 561 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF662Q6ZS27 426 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NLRX1Q86UT6 975 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NUDT5Q9UKK9 219 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RAB23Q9ULC3 237 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 FMN2Q9NZ56 1722 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SPDYE2BA6NHP3 402 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ASNSP08243 561 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SPDYE6P0CI01 402 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 THRBP10828 461 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RAD51Q06609 339 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PABPC1LQ4VXU2 614 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 USP39Q53GS9 565 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 INTS11Q5TA45 600 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 E4F1Q66K89 784 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 SLC9A4Q6AI14 798 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 GUF1Q8N442 669 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TMEM35BQ8NCS4 154 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TUBA1CQ9BQE3 449 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CABP2Q9NPB3 220 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 C12orf4Q9NQ89 552 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TRMT112Q9UI30 125 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PRPF19Q9UMS4 504 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ITM2BQ9Y287 266 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ENC1O14682 589 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 LDHBP07195 334 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 NR3C2P08235 984 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms