RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 EFTUD2Q15029 972 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 AGBL2Q5U5Z8 902 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 ANKRD22Q5VYY1 191 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 KDELC2Q7Z4H8 507 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 TADA2BQ86TJ2 420 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 MAP7D3Q8IWC1 876 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 KATNAL2Q8IYT4 538 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SLC2A14Q8TDB8 520 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SMC6Q96SB8 1091 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SLC13A1Q9BZW2 595 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 BAIAP2L1Q9UHR4 511 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 CASTOR2A6NHX0 329 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 CSPG5O95196 566 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SMIM10L2AP0DMW4 78 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SMIM10L2BP0DMW5 78 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 KDELR1P24390 212 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 PKN2Q16513 984 aaKnown RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 UBR7Q8N806 425 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 TGS1Q96RS0 853 aaKnown RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 PARK7Q99497 189 aaKnown RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SIK2Q9H0K1 926 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 BARX2Q9UMQ3 279 aaPredicted RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 B4GALT4O60513 344 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 MMP3P08254 477 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 PAEPP09466 180 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 MCF2P10911 925 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TFE3P19532 575 aaPredicted RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 MSH2P43246 934 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 ARPP19P56211 112 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 ROR1Q01973 937 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TRMT10CQ7L0Y3 403 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TTC17Q96AE7 1141 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TMEM109Q9BVC6 243 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 NSRP1Q9H0G5 558 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 NMRK2Q9NPI5 230 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 WHRNQ9P202 907 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 NUDT5Q9UKK9 219 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 hCG_1818297A0A087WSY0 165 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 AGTP01019 485 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 POMCP01189 267 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 HMGCRP04035 888 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 VDRP11473 427 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 ATP5DP30049 168 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 VCPP55072 806 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 SESN2P58004 480 aaPredicted RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 HIBCHQ6NVY1 386 aaPredicted RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 NOTUMQ6P988 496 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 FBXO36Q8NEA4 188 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 SPOCK2Q92563 424 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TBC1D31Q96DN5 1066 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 VCPIP1Q96JH7 1222 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 C16orf70Q9BSU1 422 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 CNOT10Q9H9A5 744 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 KCNH4Q9UQ05 1017 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 BRCA2P51587 3418 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 A0A087WUV0 522 aaPredicted RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TCRBV7S3A2A0A539 114 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 SIGLEC16A6NMB1 481 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 MEIS3P2A8K0S8 358 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 NEBLO76041 1014 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 CRADDP78560 199 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 ZBTB16Q05516 673 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 AP1B1Q10567 949 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 OVGP1Q12889 678 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 E2F5Q15329 346 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 VSIG1Q86XK7 387 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 XYLT1Q86Y38 959 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 SIX6OS1Q8N1H7 587 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 KIF2BQ8N4N8 673 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 APPL2Q8NEU8 664 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 PPTC7Q8NI37 304 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 GAD1Q99259 594 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 PITPNM3Q9BZ71 974 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
PRDM9-201ENST00000296682 DDX56Q9NY93 547 aaKnown RBP9.72□□□□□ -0.85
PRDM9-201ENST00000296682 A0A1W2PPM1 405 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 CILPO75339 1184 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 IGFBP6P24592 240 aaPredicted RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 RPL22P35268 128 aaKnown RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 ARL4CP56559 192 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 CORO7P57737 925 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 PTK6Q13882 451 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 ZNF449Q6P9G9 518 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 EDEM1Q92611 657 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 PTPN18Q99952 460 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 VTA1Q9NP79 307 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 AAASQ9NRG9 546 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 DNAJC25-GNG10A0A024R161 153 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 ADCY6O43306 1168 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 TRAPPC3O43617 180 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 STRNO43815 780 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms