RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 ADARP55265 1226 aaKnown RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 PPP4CP60510 307 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 ROR2Q01974 943 aaKnown RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 XRCC4Q13426 336 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 SGF29Q96ES7 293 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 ACTL7BQ9Y614 415 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 HEATR9A2RTY3 570 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 PDE2AO00408 941 aaPredicted RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 ENTPD3O75355 529 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 MYL3P08590 195 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 ATF7IP2Q5U623 682 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 EFHBQ8N7U6 833 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 RPAP3Q9H6T3 665 aaPredicted RBP11.41□□□□□ -0.58
PBRM1-201ENST00000296302 TCF7L2Q9NQB0 619 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 KCNH7Q9NS40 1196 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 TUBGCP4Q9UGJ1 667 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 SLC30A1Q9Y6M5 507 aa11.41□□□□□ -0.58
PBRM1-201ENST00000296302 SUPT7LO94864 414 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 CD4P01730 458 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 MMP10P09238 476 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 GARTP22102 1010 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 PTPN7P35236 360 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 SH3RF1Q7Z6J0 888 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 CBWD2Q8IUF1 395 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 TDRD5Q8NAT2 981 aaKnown RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 PAIP1Q9H074 479 aaKnown RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 NCKIPSDQ9NZQ3 722 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 CORO1CQ9ULV4 474 aaPredicted RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 VPS9D1Q9Y2B5 631 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 RAG1P15918 1043 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 RAB14P61106 215 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 RPL10AP62906 217 aaKnown RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 BAATQ14032 418 aaPredicted RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 PLEKHM3Q6ZWE6 761 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 UBA3Q8TBC4 463 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 THUMPD3Q9BV44 507 aaKnown RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 IMPAD1Q9NX62 359 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 KIAA1257Q9ULG3 409 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 RARAP10276 462 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 FASP25445 335 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 POU4F1Q01851 419 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 CNGA2Q16280 664 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 CEP78Q5JTW2 689 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF720Q7Z2F6 126 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 SLC25A41Q8N5S1 370 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
PBRM1-201ENST00000296302 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.58
PBRM1-201ENST00000296302 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 RAD23AP54725 363 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.59
PBRM1-201ENST00000296302 DCAF6Q58WW2 860 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 IER5Q5VY09 327 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 B3GNT6Q6ZMB0 384 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 LRRC8DQ7L1W4 858 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 PABPC5Q96DU9 382 aaKnown RBP11.4□□□□□ -0.59
PBRM1-201ENST00000296302 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.59
PBRM1-201ENST00000296302 DDX18Q9NVP1 670 aaKnown RBP11.4□□□□□ -0.59
PBRM1-201ENST00000296302 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.59
PBRM1-201ENST00000296302 PRKAA2P54646 552 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ACTL9Q8TC94 416 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ZNF398Q8TD17 642 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PLEKHA8Q96JA3 519 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 TARS2Q9BW92 718 aaKnown RBP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 LATS2Q9NRM7 1088 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 FAM49BQ9NUQ9 324 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SORCS3Q9UPU3 1222 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ASB14A6NK59 587 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 MAGEB2O15479 319 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PYGMP11217 842 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 GEMP55040 296 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 MGAT5Q09328 741 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PRKAA1Q13131 559 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 LAMC2Q13753 1193 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 GTF2H3Q13889 308 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 THEMIS2Q5TEJ8 643 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 DCUN1D1Q96GG9 259 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms