RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ASNSD1Q9NWL6 643 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 NFS1Q9Y697 457 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 KBTBD13C9JR72 458 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 LRCH4O75427 683 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 KRT10P13645 584 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 LMO2P25791 158 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ADCY8P40145 1251 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ZNF844Q08AG5 666 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 GRIK3Q13003 919 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 DENND2CQ68D51 928 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ADGRF2Q8IZF7 708 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 TMEM86AQ8N2M4 240 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 EMC1Q8N766 993 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ANKRD52Q8NB46 1076 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 CCHCR1Q8TD31 782 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 RSAD1Q9HA92 442 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 TRIM17Q9Y577 477 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 A8MXQ7 604 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 DPYSL4O14531 572 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 CYP11A1P05108 521 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 COL6A1P12109 1028 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 DESP17661 470 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 OR6B2Q6IFH4 312 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ZDHHC17Q8IUH5 632 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ARFGAP1Q8N6T3 406 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 OR2W6PQ8NHA6 318 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 HNRNPABQ99729 332 aaKnown RBP9.6□□□□□ -0.87
PDPN-201ENST00000294489 ZWILCHQ9H900 591 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 NOD1Q9Y239 953 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 EFR3BQ9Y2G0 817 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 hCG_1818297A0A087WSY0 165 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 HUS1O60921 280 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 RARGP13631 454 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 IGFBP6P24592 240 aaPredicted RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 CLCNKBP51801 687 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 SLC25A11Q02978 314 aaKnown RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 TAZQ16635 292 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 TXNRD3NBQ6F5E7 133 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 DRICH1Q6PGQ1 229 aaPredicted RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 OLFML1Q6UWY5 402 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 HOOK3Q86VS8 718 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDPN-201ENST00000294489 SNX25Q9H3E2 840 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 E5RJQ4 531 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 M0QZQ0 153 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CYB561D2O14569 222 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 LIASO43766 372 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 NUDT17P0C025 328 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 SELPP16109 830 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ACTN2P35609 894 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CDKN2BP42772 138 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 SCNN1GP51170 649 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ZNF143P52747 638 aaPredicted RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 BYSLQ13895 437 aaKnown RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 TRIP13Q15645 432 aaPredicted RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 PMF1Q6P1K2 205 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CROCCP2Q86T23 111 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CRIPAKQ8N1N5 446 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 SH2D3CQ8N5H7 860 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ARFGAP2Q8N6H7 521 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CNPY3Q9BT09 278 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CAPS2Q9BXY5 557 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ELAC1Q9H777 363 aaKnown RBP9.59□□□□□ -0.87
PDPN-201ENST00000294489 FAM49BQ9NUQ9 324 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 ZNF148Q9UQR1 794 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 LTBP2Q14767 1821 aa9.59□□□□□ -0.87
PDPN-201ENST00000294489 C3orf70A6NLC5 250 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 HCRTO43612 131 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 NR1D1P20393 614 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 GPD1P21695 349 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PCK1P35558 622 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 BCAT1P54687 386 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 BST2Q10589 180 aaKnown RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 SMTNL2Q2TAL5 461 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KRT71Q3SY84 523 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KIAA0319Q5VV43 1072 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 SLC24A5Q71RS6 500 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 CCDC25Q86WR0 208 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 ACSF2Q96CM8 615 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 SENP8Q96LD8 212 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 FAM118BQ9BPY3 351 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 ANAPC5Q9UJX4 755 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 USP18Q9UMW8 372 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms