RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CCT7Q99832 543 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 PLAGL2Q9UPG8 496 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 M0QYV0 167 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 CYP26A1O43174 497 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 TLE2Q04725 743 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 UGP2Q16851 508 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 FAM102AQ5T9C2 384 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 PLPPR4Q7Z2D5 763 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 OSBPL8Q9BZF1 889 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ENO3P13929 434 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 KLRC1P26715 233 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SCTRP47872 440 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ADRM1Q16186 407 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 HAUS6Q7Z4H7 955 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ADCK1Q86TW2 530 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 LRRC34Q8IZ02 419 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 GPD1LQ8N335 351 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 PCYOX1LQ8NBM8 494 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 GPR20Q99678 358 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZC3H7BQ9UGR2 993 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 O00370 1275 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 TMCC1O94876 653 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 KRT16P08779 473 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 FMO5P49326 533 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 GPC3P51654 580 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 RAP1GDS1P52306 607 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZNF555Q8NEP9 628 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 C2orf40Q9H1Z8 148 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 IL1RAPL1Q9NZN1 696 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZNF212Q9UDV6 495 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 APOL1O14791 398 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 FNTAP49354 379 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 CENPCQ03188 943 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 COG4Q9H9E3 785 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 TUFT1Q9NNX1 390 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 AKAP10O43572 662 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 ADAMTS4O75173 837 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 SEC24DO94855 1032 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 KCNA2P16389 499 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 DEFA1P59665 94 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 DEFA3P59666 94 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 NSUN2Q08J23 767 aaKnown RBP eCLIP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 LHX8Q68G74 356 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 SEPT8Q92599 483 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 DHX35Q9H5Z1 703 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 DCLRE1BQ9H816 532 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 S100A5P33763 92 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 ERFP50548 548 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 PAPD7Q5XG87 772 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 LXNQ9BS40 222 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 FRMD8Q9BZ67 464 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 RUBCNLQ9H714 662 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
SYNGAP1-201ENST00000293748 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZCWPW2Q504Y3 356 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 LVRNQ6Q4G3 990 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 KLHDC9Q8NEP7 349 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 RFC5P40937 340 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PTK7Q13308 1070 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 DDIASQ8IXT1 998 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 MKNK1Q9BUB5 465 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 GID8Q9NWU2 228 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 RBAKQ9NYW8 714 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 TSC22D4Q9Y3Q8 395 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms