RNA–Protein interactions for RNA: ENST00000292579.11

ZNF250-201, Transcript of zinc finger protein 250, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF250, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-201ENST00000292579 USP41Q3LFD5 358 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 RRM2BQ7LG56 351 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 NAT16Q8N8M0 369 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 CCDC3Q9BQI4 270 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 WDR18Q9BV38 432 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 ATP13A1Q9HD20 1204 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 SF3B1O75533 1304 aaKnown RBP eCLIP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 ACKR2O00590 384 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 CTSEP14091 401 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 CARSP49589 748 aaKnown RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 PTPN11Q06124 597 aaPredicted RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 DDX39BQ13838 428 aaKnown RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 LRRC14Q15048 493 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 NR1H4Q96RI1 486 aaPredicted RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 ZDHHC9Q9Y397 364 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 UBR1Q8IWV7 1749 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 AP3B1O00203 1094 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 P4HA2O15460 535 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 MICAL2O94851 1124 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 ESRRAP11474 423 aaPredicted RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 MORF4L2Q15014 288 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 CEP41Q9BYV8 373 aa9.72□□□□□ -0.85
ZNF250-201ENST00000292579 DMAP1Q9NPF5 467 aaPredicted RBP9.72□□□□□ -0.85
ZNF250-201ENST00000292579 PDZK1P1A8MUH7 402 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 MMP3P08254 477 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 CCR1P32246 355 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 PPIGQ13427 754 aaKnown RBP eCLIP9.71□□□□□ -0.851e-9■■■■□ 20.6
ZNF250-201ENST00000292579 EFTUD2Q15029 972 aaKnown RBP eCLIP9.71□□□□□ -0.85
ZNF250-201ENST00000292579 TRIM55Q9BYV6 548 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 PITPNM3Q9BZ71 974 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 PNMA8BQ9ULN7 279 aaPredicted RBP9.71□□□□□ -0.85
ZNF250-201ENST00000292579 BARX2Q9UMQ3 279 aaPredicted RBP9.71□□□□□ -0.85
ZNF250-201ENST00000292579 H2AFYO75367 372 aaKnown RBP9.71□□□□□ -0.85
ZNF250-201ENST00000292579 TRMT11Q7Z4G4 463 aaKnown RBP9.71□□□□□ -0.85
ZNF250-201ENST00000292579 IFNL1Q8IU54 200 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 VGLL2Q8N8G2 317 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 TSPAN17Q96FV3 270 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 SPACA7Q96KW9 195 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 MYOCQ99972 504 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 OSBPL8Q9BZF1 889 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 BRD8Q9H0E9 1235 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 AASDHPPTQ9NRN7 309 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 SMARCAL1Q9NZC9 954 aa9.71□□□□□ -0.85
ZNF250-201ENST00000292579 CENPAP49450 140 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 TUBP50607 506 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 TOB1P50616 345 aaPredicted RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 CAMK2GQ13555 558 aaPredicted RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ANKRD20A4Q4UJ75 823 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ANKRD20A8PQ5CZ79 823 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ANKRD20A2Q5SQ80 823 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ANKRD20A1Q5TYW2 823 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 C11orf74Q86VG3 221 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 IL31RAQ8NI17 732 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 FICDQ9BVA6 458 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 NEUROG2Q9H2A3 272 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 WWOXQ9NZC7 414 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 KIF17Q9P2E2 1029 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 TFR2Q9UP52 801 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 TISP43B9A030 160 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 C5orf58C9J3I9 102 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 PYGLP06737 847 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 HDCP19113 662 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 USP13Q92995 863 aaPredicted RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ZNF669Q96BR6 464 aaPredicted RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 F9P00740 461 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 SELPP16109 830 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 EEF1B2P24534 225 aaKnown RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 EIF3BP55884 814 aaKnown RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 HTRA3P83110 453 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 PSMD5Q16401 504 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 NAPEPLDQ6IQ20 393 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 VMP1Q96GC9 406 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 C11orf49Q9H6J7 331 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 ADA2Q9NZK5 511 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 SUFUQ9UMX1 484 aa9.71□□□□□ -0.86
ZNF250-201ENST00000292579 NDRG2Q9UN36 371 aaKnown RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
ZNF250-201ENST00000292579 PPP1R3GB7ZBB8 358 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 ANXA9O76027 345 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 HOXC6P09630 235 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 CYP11B1P15538 503 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 GEMP55040 296 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 HIC1Q14526 733 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 NAB2Q15742 525 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 HIST2H2ACQ16777 129 aaPredicted RBP9.7□□□□□ -0.86
ZNF250-201ENST00000292579 HIST2H2AA3Q6FI13 130 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 RXFP2Q8WXD0 754 aa9.7□□□□□ -0.86
ZNF250-201ENST00000292579 SPASTQ9UBP0 616 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms