RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TRIM66O15016 1216 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 PAPSS1O43252 624 aaPredicted RBP22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 PTPROQ16827 1216 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 CLEC4CQ8WTT0 213 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 C18orf8Q96DM3 657 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 PIWIL1Q96J94 861 aaKnown RBP22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 NOX5Q96PH1 765 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 LACRTQ9GZZ8 138 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 TLE6Q9H808 572 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 YIPF1Q9Y548 306 aa22.98■■□□□ 1.27
PDLIM3-203ENST00000284771 ANKRD62A6NC57 917 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ATMINO43313 823 aaPredicted RBP22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 LCP1P13796 627 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 RRM1P23921 792 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ELF1P32519 619 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 NRIP1P48552 1158 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 TKTL1P51854 596 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 SLC5A3P53794 718 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 USP46P62068 366 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 C1QBPQ07021 282 aaKnown RBP22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 MTMR3Q13615 1198 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 KCNC3Q14003 757 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ADGRE1Q14246 886 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 DUSP6Q16828 381 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 SLC7A14Q8TBB6 771 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 GIPC2Q8TF65 315 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 NDRG1Q92597 394 aaKnown RBP22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 VCPIP1Q96JH7 1222 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 FAM161BQ96MY7 647 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 INSL5Q9Y5Q6 135 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 EYSQ5T1H1 3165 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 TCRBV5S1A1TA0A578 114 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 PRRG1O14668 218 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 H2AFZP0C0S5 128 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 KRT83P78385 493 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ADIGQ0VDE8 80 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 C10orf76Q5T2E6 689 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 H2AFVQ71UI9 128 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 XYLT1Q86Y38 959 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 VN1R2Q8NFZ6 395 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ARHGEF26Q96DR7 871 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 SPATA17Q96L03 361 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 CYLDQ9NQC7 956 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 PPP2R2CQ9Y2T4 447 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 USP3Q9Y6I4 520 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 DUSP10Q9Y6W6 482 aa22.97■■□□□ 1.27
PDLIM3-203ENST00000284771 ZNF638Q14966 1978 aaKnown RBP22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 C1RP00736 705 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 C8AP07357 584 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 RPL10AP62906 217 aaKnown RBP22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 TWF1Q12792 350 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 FEZF2Q8TBJ5 459 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 TRIM44Q96DX7 344 aaPredicted RBP22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 MIS12Q9H081 205 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 LRRC4Q9HBW1 653 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 IL37Q9NZH6 218 aa22.96■■□□□ 1.27
PDLIM3-203ENST00000284771 IPO7O95373 1038 aaKnown RBP22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 VAV2P52735 878 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 DENND5BQ6ZUT9 1274 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 FAM183BPQ6ZVS7 135 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 NUP93Q8N1F7 819 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 KHSRPQ92945 711 aaKnown RBP eCLIP22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 SYNCQ9H7C4 482 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 MAN1C1Q9NR34 630 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 DOCK6Q96HP0 2047 aa22.95■■□□□ 1.26
PDLIM3-203ENST00000284771 RFPL2O75678 378 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 GJB6O95452 261 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 CALB1P05937 261 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 CCDC175P0C221 793 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 USP17L7P0C7H9 530 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 TMEM253P0C7T8 217 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 ACADSBP45954 432 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 PGFP49763 221 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 TAF5Q15542 800 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 TCEAL5Q5H9L2 206 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 ZNF697Q5TEC3 545 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 PPP1R2P3Q6NXS1 205 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 OLFML1Q6UWY5 402 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 BHLHA9Q7RTU4 235 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 IPO4Q8TEX9 1081 aaKnown RBP22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 ZNF653Q96CK0 615 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 MCRS1Q96EZ8 462 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 ULBP1Q9BZM6 244 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 PLEKHA4Q9H4M7 779 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 TRIM10Q9UDY6 481 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 CNOT8Q9UFF9 292 aaKnown RBP22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 SALL4Q9UJQ4 1053 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 INTUQ9ULD6 942 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 MTCH2Q9Y6C9 303 aa22.94■■□□□ 1.26
PDLIM3-203ENST00000284771 USP27XA6NNY8 438 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 HMGA1P17096 107 aaKnown RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 ALDH1A3P47895 512 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 GPC5P78333 572 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 HYAL1Q12794 435 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 IFRD2Q12894 506 aaPredicted RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 ZNF268Q14587 947 aaPredicted RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 PM20D1Q6GTS8 502 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 NSUN3Q9H649 340 aaKnown RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 LMCD1Q9NZU5 365 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 MYO1AQ9UBC5 1043 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms