RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 UBR7Q8N806 425 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 ARL14EPQ8N8R7 260 aaPredicted RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 PDZD8Q8NEN9 1154 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 NEK11Q8NG66 645 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 SCAMP5Q8TAC9 235 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 ELSPBP1Q96BH3 223 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 CEP295NLQ96MC4 621 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 ASB16Q96NS5 453 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 SPAG5Q96R06 1193 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 RPP25Q9BUL9 199 aaKnown RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 TRMT61BQ9BVS5 477 aaKnown RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 SLC46A2Q9BY10 475 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 DUSP16Q9BY84 665 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 TSPY26PQ9H489 355 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 FBXO44Q9H4M3 255 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 BRD9Q9H8M2 597 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 NLRC4Q9NPP4 1024 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 GMIPQ9P107 970 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 LIMA1Q9UHB6 759 aaKnown RBP6.9□□□□□ -1.3
CD44-204ENST00000279452 KIAA1257Q9ULG3 409 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 CA14Q9ULX7 337 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 DUSP12Q9UNI6 340 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 SSUH2Q9Y2M2 353 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 FHOD1Q9Y613 1164 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 MYO7AQ13402 2215 aa6.9□□□□□ -1.3
CD44-204ENST00000279452 EYSQ5T1H1 3165 aa6.9□□□□□ -1.31
CD44-204ENST00000279452 ANHXE9PGG2 379 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PI4K2BG5E9Z4 385 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 O00370 1275 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 ZNF263O14978 683 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 XPO1O14980 1071 aaKnown RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 ECI2O75521 394 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PRAMEF12O95522 483 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SETSIPP0DME0 302 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 IRF1P10914 325 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SRFP11831 508 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 UCHL3P15374 230 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PSMC3P17980 439 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 HDCP19113 662 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 GDI1P31150 447 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PPP3CCP48454 512 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TKTL1P51854 596 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 GPC5P78333 572 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PLCB2Q00722 1185 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PTK2Q05397 1052 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SIGLEC14Q08ET2 396 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 ADIGQ0VDE8 80 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 DRAP1Q14919 205 aaPredicted RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 STILQ15468 1287 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 KLHDC7AQ5VTJ3 777 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TAF3Q5VWG9 929 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 VITQ6UXI7 678 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TRIM67Q6ZTA4 783 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 RSRC2Q7L4I2 434 aaKnown RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 CACNA2D4Q7Z3S7 1137 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TMEM150AQ86TG1 271 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 MON1AQ86VX9 555 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TTC30AQ86WT1 665 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SIX5Q8N196 739 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 CELF5Q8N6W0 485 aaKnown RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 FLCNQ8NFG4 579 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TTC8Q8TAM2 541 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 BPIFB1Q8TDL5 484 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 CSGALNACT1Q8TDX6 532 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TFAP2BQ92481 460 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 GOLGA1Q92805 767 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 EDAQ92838 391 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 CYP2S1Q96SQ9 504 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 FUCA2Q9BTY2 467 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TTLL2Q9BWV7 592 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 C1QTNF1Q9BXJ1 281 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 PLA2G2FQ9BZM2 168 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SYNCQ9H7C4 482 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 CSNK1G1Q9HCP0 422 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 SIX2Q9NPC8 291 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 ACP6Q9NPH0 428 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TDP1Q9NUW8 608 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 THG1LQ9NWX6 298 aaKnown RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 CHORDC1Q9UHD1 332 aaPredicted RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 AJAP1Q9UKB5 411 aaPredicted RBP6.89□□□□□ -1.31
CD44-204ENST00000279452 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
CD44-204ENST00000279452 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
CD44-204ENST00000279452 TRANK1O15050 2925 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 A0A1W2PQH9 124 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 ZNF840PA6NDX5 716 aa6.88□□□□□ -1.31
CD44-204ENST00000279452 TMEM221A6NGB7 291 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms