RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 ADAM33Q9BZ11 813 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 SCINQ9Y6U3 715 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 TRIOBPQ9H2D6 2365 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 LRRD1A4D1F6 860 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 SCAMP3O14828 347 aaKnown RBP13.98□□□□□ -0.17
ACER3-201ENST00000278544 DGKIO75912 1065 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 CD48P09326 243 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 TCP1P17987 556 aaKnown RBP13.98□□□□□ -0.17
ACER3-201ENST00000278544 OR1D2P34982 312 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 KCNJ1P48048 391 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 DUSP4Q13115 394 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
ACER3-201ENST00000278544 KCNT2Q6UVM3 1135 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 SPATA4Q8NEY3 305 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 COLEC11Q9BWP8 271 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 YJEFN3A6XGL0 299 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 E7ENQ6 273 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 KRIT1O00522 736 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 CAPN9O14815 690 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 TADA3O75528 432 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 PROSCO94903 275 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 IL1R2P27930 398 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 PPP6R3Q5H9R7 873 aaPredicted RBP13.98□□□□□ -0.17
ACER3-201ENST00000278544 SYPL2Q5VXT5 272 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 FAM131BQ86XD5 332 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 LRRC43Q8N309 656 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 TRIM11Q96F44 468 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 CALN1Q9BXU9 219 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
ACER3-201ENST00000278544 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 FGBP02675 491 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 AMHP03971 560 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 TRADDQ15628 312 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 CFAP221Q4G0U5 840 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 ARFGAP1Q8N6T3 406 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 MSANTD4Q8NCY6 345 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 TMEM169Q96HH4 297 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 NAALADL1Q9UQQ1 740 aa13.98□□□□□ -0.17
ACER3-201ENST00000278544 SPTBN5Q9NRC6 3674 aaKnown RBP13.97□□□□□ -0.17
ACER3-201ENST00000278544 TUBB4AP04350 444 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 MYBL1P10243 752 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 ADCY2Q08462 1091 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 PKDCCQ504Y2 493 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 SLFN11Q7Z7L1 901 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 TMEM86AQ8N2M4 240 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 UBL4BQ8N7F7 174 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.97□□□□□ -0.17
ACER3-201ENST00000278544 LRRC1Q9BTT6 524 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 CDH9Q9ULB4 789 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 BTNL10A8MVZ5 291 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 KRT1P04264 644 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 VPS41P49754 854 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 PRUNE1Q86TP1 453 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 DEFB106AQ8N104 65 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 HNRNPABQ99729 332 aaKnown RBP13.97□□□□□ -0.17
ACER3-201ENST00000278544 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
ACER3-201ENST00000278544 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 STRIP2Q9ULQ0 834 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 RALGAPA2Q2PPJ7 1873 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 FPGSQ05932 587 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
ACER3-201ENST00000278544 FAM172AQ8WUF8 416 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.178e-6■■■□□ 18.5
ACER3-201ENST00000278544 VN1R3Q9BXE9 311 aa13.97□□□□□ -0.17
ACER3-201ENST00000278544 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
ACER3-201ENST00000278544 SIGLEC16A6NMB1 481 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 M0QZQ0 153 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 LRCH4O75427 683 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 NCAM1P13591 858 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 MIPP30301 263 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 AARSP49588 968 aaKnown RBP eCLIP13.96□□□□□ -0.17
ACER3-201ENST00000278544 ADCY1Q08828 1119 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 WHAMMP3Q1A5X7 153 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 ZC3H12AQ5D1E8 599 aaKnown RBP13.96□□□□□ -0.17
ACER3-201ENST00000278544 OLFML1Q6UWY5 402 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 CEP112Q8N8E3 955 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 GOLGA1Q92805 767 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 SF3B1O75533 1304 aaKnown RBP eCLIP13.96□□□□□ -0.173e-6■■■■■ 110.9
ACER3-201ENST00000278544 RALAP11233 206 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 CDH5P33151 784 aaPredicted RBP13.96□□□□□ -0.17
ACER3-201ENST00000278544 SLC6A3Q01959 620 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 ARHGAP17Q68EM7 881 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 TTC39CQ8N584 583 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 ACBD6Q9BR61 282 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 IP6K2Q9UHH9 426 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
ACER3-201ENST00000278544 KIAA0355O15063 1070 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 MDM4O15151 490 aa13.95□□□□□ -0.18
ACER3-201ENST00000278544 RNF8O76064 485 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms