RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 BOLA3Q53S33 107 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 CDCA2Q69YH5 1023 aaPredicted RBP9.4□□□□□ -0.91
SEC16A-201ENST00000277537 TXNRD3NBQ6F5E7 133 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 NPNTQ6UXI9 565 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 SYDE1Q6ZW31 735 aaPredicted RBP9.4□□□□□ -0.91
SEC16A-201ENST00000277537 KATNAL2Q8IYT4 538 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 CEP41Q9BYV8 373 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 CNOT10Q9H9A5 744 aaKnown RBP9.4□□□□□ -0.91
SEC16A-201ENST00000277537 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 SIX4Q9UIU6 781 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 GMNCA6NCL1 334 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 FSCN2O14926 492 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 MT-ND3P03897 115 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 CD52P31358 61 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 RABGGTBP53611 331 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 IFI35P80217 286 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 DPY19L2P1Q6NXN4 242 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 GLB1LQ6UWU2 654 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 C3orf62Q6ZUJ4 267 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 TRMT10CQ7L0Y3 403 aaKnown RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 PID1Q7Z2X4 250 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 NLRP14Q86W24 1093 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 ADAM2Q99965 735 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 ALG13Q9NP73 1137 aaKnown RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 DDIT4Q9NX09 232 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 IPPQ9Y573 584 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 A0A087WUV0 522 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 AGPSO00116 658 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 BST2Q10589 180 aaKnown RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 KDELC2Q7Z4H8 507 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 VPS52Q8N1B4 723 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 DPEP3Q9H4B8 488 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 ABI2Q9NYB9 513 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 CAPN7Q9Y6W3 813 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 SMIM35A0A1B0GVV1 85 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 KDELR1P24390 212 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 CHKAP35790 457 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 INHBEP58166 350 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
SEC16A-201ENST00000277537 SH3PXD2AQ5TCZ1 1133 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 GIMAP7Q8NHV1 300 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 SENP8Q96LD8 212 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 PCYOX1Q9UHG3 505 aa9.39□□□□□ -0.91
SEC16A-201ENST00000277537 TULP2O00295 520 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 TADA2AO75478 443 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 CD48P09326 243 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 CPB1P15086 417 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PECAM1P16284 738 aaPredicted RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LMO2P25791 158 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 TKTL1P51854 596 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PDE1BQ01064 536 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 CCDC14Q49A88 953 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PMF1Q6P1K2 205 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LRRC31Q6UY01 552 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PCGF5Q86SE9 256 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 VSIG1Q86XK7 387 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PPM1EQ8WY54 764 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 DDX27Q96GQ7 796 aaKnown RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 TSNARE1Q96NA8 513 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 SDCBP2Q9H190 292 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PIH1D1Q9NWS0 290 aaKnown RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 WHRNQ9P202 907 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 RIPK2O43353 540 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LRCH4O75427 683 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 PCSK1P29120 753 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 IL9RQ01113 521 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 SETDB1Q15047 1291 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 EFHC1Q5JVL4 640 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 SRLQ86TD4 932 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 IFNL1Q8IU54 200 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 SPATA2LQ8IUW3 424 aaPredicted RBP9.38□□□□□ -0.91
SEC16A-201ENST00000277537 DEFB106AQ8N104 65 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LRRC19Q9H756 370 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 CTNNAL1Q9UBT7 734 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 MORF4L1Q9UBU8 362 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 NUDT5Q9UKK9 219 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LTBP1Q14766 1721 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 COL1A2P08123 1366 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 QSER1Q2KHR3 1735 aa9.38□□□□□ -0.91
SEC16A-201ENST00000277537 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms