RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NRAPQ86VF7 1730 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 PMM2O15305 246 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 C4BPAP04003 597 aaKnown RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 SERPINB6P35237 376 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 GMPRP36959 345 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 LIN52Q52LA3 116 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 SFT2D3Q587I9 215 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 TCHHL1Q5QJ38 904 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 C16orf46Q6P387 395 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 KCTD6Q8NC69 237 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 SLC35B2Q8TB61 432 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ZFAND2BQ8WV99 257 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 E2F7Q96AV8 911 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF668Q96K58 619 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 HAPLN2Q9GZV7 340 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 STRIP2Q9ULQ0 834 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ITGBL1O95965 494 aaPredicted RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 RPS6P62753 249 aaKnown RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 TBC1D25Q3MII6 688 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 RAB6CQ53S08 254 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 DARS2Q6PI48 645 aaKnown RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 SPATA18Q8TC71 538 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 RAB6CQ9H0N0 254 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
COL8A1-202ENST00000273342 MAD1L1Q9Y6D9 718 aa13.46□□□□□ -0.25
COL8A1-202ENST00000273342 AQP4P55087 323 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 DLG1Q12959 904 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 NCOA4Q13772 614 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 CCDC142Q17RM4 750 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.26
COL8A1-202ENST00000273342 NKD2Q969F2 451 aaPredicted RBP13.46□□□□□ -0.26
COL8A1-202ENST00000273342 FAF2Q96CS3 445 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 RMDN3Q96TC7 470 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 TCHPQ9BT92 498 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 RAB6BQ9NRW1 208 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 PIH1D1Q9NWS0 290 aaKnown RBP13.46□□□□□ -0.26
COL8A1-202ENST00000273342 CENPFP49454 3210 aa13.46□□□□□ -0.26
COL8A1-202ENST00000273342 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.26
COL8A1-202ENST00000273342 DNAJC6O75061 913 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 TM7SF2O76062 418 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 PEX2P28328 305 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 GRIA2P42262 883 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 OSTNP61366 133 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 TFAP2BQ92481 460 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 MYOCOSA0A1B0GUC4 107 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 A8MXQ7 604 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 WDR64B1ANS9 1081 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 STAM2O75886 525 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 ACTR3P61158 418 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 DEUP1Q05D60 604 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 DPYSL3Q14195 570 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 KRT72Q14CN4 511 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 TRIP10Q15642 601 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 CDO1Q16878 200 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 GRAMD1BQ3KR37 738 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 SH3PXD2AQ5TCZ1 1133 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 RNF111Q6ZNA4 994 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 ARFGAP1Q8N6T3 406 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 AGR3Q8TD06 166 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 ALKBH8Q96BT7 664 aaKnown RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 ST6GALNAC4Q9H4F1 302 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 NXF1Q9UBU9 619 aaKnown RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 TAGLN3Q9UI15 199 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 HEY1Q9Y5J3 304 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 H7C0C1 242 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 MSX2P35548 267 aaPredicted RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 ATP5OP48047 213 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 SCNN1BP51168 640 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
COL8A1-202ENST00000273342 DHRS4Q9BTZ2 278 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
COL8A1-202ENST00000273342 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-202ENST00000273342 A0A0B4J269 797 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
COL8A1-202ENST00000273342 EXTL3O43909 919 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms