RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CYB5D1Q6P9G0 228 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ZPBP2Q6X784 338 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PPP1R21Q6ZMI0 780 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TRPM8Q7Z2W7 1104 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 UHMK1Q8TAS1 419 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ATG4AQ8WYN0 398 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 FAM212AQ96EL1 285 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CFAP57Q96MR6 1250 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TARS2Q9BW92 718 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 EIF2AQ9BY44 585 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TRIM7Q9C029 511 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ZNF518BQ9C0D4 1074 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 FZD8Q9H461 694 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 YY1AP1Q9H869 796 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 NINJ2Q9NZG7 142 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SLC12A4Q9UP95 1085 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 DRG1Q9Y295 367 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 USP15Q9Y4E8 981 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 UPP2O95045 317 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 MMP8P22894 467 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SLC8A1P32418 973 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CHKAP35790 457 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SLC18A1P54219 525 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 NCOA4Q13772 614 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 RASA2Q15283 850 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SNCBQ16143 134 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 KYNUQ16719 465 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 KCTD19Q17RG1 926 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 UBXN11Q5T124 520 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 IZUMO3Q5VZ72 239 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 EEF1DP3Q658K8 133 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TWF2Q6IBS0 349 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 HIBCHQ6NVY1 386 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM270Q6UE05 265 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 VSTM1Q6UX27 236 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ARHGEF18Q6ZSZ5 1173 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CCDC91Q7Z6B0 441 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TDRPQ86YL5 185 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PARP9Q8IXQ6 854 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TDHQ8IZJ6 230 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 UBR7Q8N806 425 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CKAP2Q8WWK9 683 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ELAC2Q9BQ52 826 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 FRMD8P1Q9BZ68 369 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PHACTR1Q9C0D0 580 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PDZD7Q9H5P4 517 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 RGS18Q9NS28 235 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PRMT7Q9NVM4 692 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 DDX56Q9NY93 547 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SENP1Q9P0U3 644 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 R3HDM2Q9Y2K5 976 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CEP290O15078 2479 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CNTNAP2Q9UHC6 1331 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM191CA6NGB0 347 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 C9IYK1 514 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ACKR2O00590 384 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 MGRN1O60291 552 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 NPTXRO95502 500 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ASS1P00966 412 aaKnown RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM191BP0C7N4 346 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 BRAFP15056 766 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ATP2A2P16615 1042 aaKnown RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 IFNAR2P48551 515 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ACOT2P49753 483 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 GATMP50440 423 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 RABGGTBP53611 331 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 TAS2R40P59535 323 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 RIPK1Q13546 671 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 PIGHQ14442 188 aaPredicted RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 MORF4L2Q15014 288 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 FAM187BQ17R55 369 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 UBAP2Q5T6F2 1119 aaKnown RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ANKS1BQ7Z6G8 1248 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ZBTB33Q86T24 672 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 BRSK2Q8IWQ3 736 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 NIPA2Q8N8Q9 360 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ZNF606Q8WXB4 792 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 LPPQ93052 612 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ZBTB45Q96K62 511 aaPredicted RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 MAGEB18Q96M61 343 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 HERPUD2Q9BSE4 406 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 APOBEC3GQ9HC16 384 aaKnown RBP9.15□□□□□ -0.94
TRIM43-201ENST00000272395 HAUS2Q9NVX0 235 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 EURLQ9NYK6 297 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms