RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
CAPN9-201ENST00000271971 ACSF2Q96CM8 615 aaPredicted RBP13.15□□□□□ -0.3
CAPN9-201ENST00000271971 B3GALT6Q96L58 329 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 COL4A6Q14031 1691 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 NT5C1B-RDH14C9J2C7 533 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 NPR3P17342 541 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 FLT3P36888 993 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 RWDD2BP57060 319 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TAP1Q03518 808 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM110Q86TL2 294 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 PIGZQ86VD9 579 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 METTL23Q86XA0 190 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TMLHEQ9NVH6 421 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 NRP1O14786 923 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 FAM163BP0C2L3 166 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 CSF2RAP15509 400 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 PCSK1P29120 753 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 MAN1A1P33908 653 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 SLC11A1P49279 550 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 PTPRSQ13332 1948 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 RAB6CQ53S08 254 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 NECAB2Q7Z6G3 386 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 ARFGAP1Q8N6T3 406 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 NDRG1Q92597 394 aaKnown RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 KRT12Q99456 494 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 RAB6CQ9H0N0 254 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 KRIT1O00522 736 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 ZMYND10O75800 440 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 AP1G2O75843 785 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 PARNO95453 639 aaKnown RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 ITIH3Q06033 890 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 ADIGQ0VDE8 80 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 INTS6LQ5JSJ4 861 aaKnown RBP13.14□□□□□ -0.31
CAPN9-201ENST00000271971 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 SEL1L2Q5TEA6 688 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 CCDC91Q7Z6B0 441 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 MARCH5Q9NX47 278 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 TMEM59LQ9UK28 342 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
CAPN9-201ENST00000271971 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 LRCH4O75427 683 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 TADA2AO75478 443 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 SLC6A3Q01959 620 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 IKBKEQ14164 716 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
CAPN9-201ENST00000271971 CDO1Q16878 200 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 C15orf59Q2T9L4 293 aaPredicted RBP13.13□□□□□ -0.31
CAPN9-201ENST00000271971 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 FAM117BQ6P1L5 589 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 RHOT1Q8IXI2 618 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 FAM76AQ8TAV0 307 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
CAPN9-201ENST00000271971 SMOQ99835 787 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 HERPUD2Q9BSE4 406 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 DDX47Q9H0S4 455 aaKnown RBP13.13□□□□□ -0.31
CAPN9-201ENST00000271971 DSEQ9UL01 958 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 C2CD4BA6NLJ0 364 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 PSTPIP1O43586 416 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 ACRP10323 421 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 NDUFV1P49821 464 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 ANKS1BQ7Z6G8 1248 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 ZDHHC14Q8IZN3 488 aa13.13□□□□□ -0.31
CAPN9-201ENST00000271971 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms