RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.21
PRDM16-201ENST00000270722 PAX7P23759 505 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 CAMK1DQ8IU85 385 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 CYP4Z2PQ8N1L4 340 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 FAM162AQ96A26 154 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 PAGE5Q96GU1 130 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 SGSM3Q96HU1 749 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 ADI1Q9BV57 179 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 ZSWIM5Q9P217 1185 aa13.71□□□□□ -0.21
PRDM16-201ENST00000270722 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 XYLBO75191 536 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 CDH3P22223 829 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 OCLNQ16625 522 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 ABRAXAS1Q6UWZ7 409 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 UNC45BQ8IWX7 931 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 MICU2Q8IYU8 434 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 MSANTD3Q96H12 275 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 SHROOM2Q13796 1616 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 CLPTM1O96005 669 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 CSE1LP55060 971 aaKnown RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 UBE2SQ16763 222 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 EME1Q96AY2 570 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 ZC3H10Q96K80 434 aaKnown RBP13.71□□□□□ -0.22
PRDM16-201ENST00000270722 PCSK1NQ9UHG2 260 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 TMCO1Q9UM00 188 aa13.71□□□□□ -0.22
PRDM16-201ENST00000270722 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 MAGEB16A2A368 324 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 AVPR1AP37288 418 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 ING4Q9UNL4 249 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 PTPRTO14522 1441 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 MGAT5BQ3V5L5 792 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 TRIQKQ629K1 86 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 TGS1Q96RS0 853 aaKnown RBP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 PARD6BQ9BYG5 372 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 EYA4O95677 639 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 LSP1P33241 339 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 FLT3P36888 993 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 EPHB3P54753 998 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 HIPK4Q8NE63 616 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 IL17REQ8NFR9 667 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 COL15A1P39059 1388 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 APRTP07741 180 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 PTPN3P26045 913 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 UBE3AQ05086 875 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 LAYNQ6UX15 382 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 NCKAP1Q9Y2A7 1128 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 CCDC130P13994 396 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 SOAT1P35610 550 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
PRDM16-201ENST00000270722 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 FAM153AQ9UHL3 310 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 ZNF879B4DU55 563 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 AP1G2O75843 785 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 IFNA16P05015 189 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 LCP1P13796 627 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 GPC1P35052 558 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 NEK5Q6P3R8 708 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 JADE3Q92613 823 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
PRDM16-201ENST00000270722 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
PRDM16-201ENST00000270722 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRDM16-201ENST00000270722 KCNN4O15554 427 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 S100GP29377 79 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 KRT31Q15323 416 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 ELAC2Q9BQ52 826 aaKnown RBP13.69□□□□□ -0.22
PRDM16-201ENST00000270722 KIFC1Q9BW19 673 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 VPS26AO75436 327 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 BCL10O95999 233 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 DYNLL1P63167 89 aaKnown RBP13.69□□□□□ -0.22
PRDM16-201ENST00000270722 GRM4Q14833 912 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 LENG1Q96BZ8 264 aaPredicted RBP13.69□□□□□ -0.22
PRDM16-201ENST00000270722 RAD18Q9NS91 495 aa13.69□□□□□ -0.22
PRDM16-201ENST00000270722 DYRK1BQ9Y463 629 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms