RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 EDAQ92838 391 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 THAP2Q9H0W7 228 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 FAM124BQ9H5Z6 455 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-201ENST00000270061 CISHQ9NSE2 258 aa26.02■■□□□ 1.76
SSBP4-201ENST00000270061 CLSTN1O94985 981 aa26.01■■□□□ 1.75
SSBP4-201ENST00000270061 GPC5P78333 572 aa26.01■■□□□ 1.75
SSBP4-201ENST00000270061 RTL10Q7L3V2 364 aa26.01■■□□□ 1.75
SSBP4-201ENST00000270061 SLC35G2Q8TBE7 412 aa26.01■■□□□ 1.75
SSBP4-201ENST00000270061 TLR10Q9BXR5 811 aa26.01■■□□□ 1.75
SSBP4-201ENST00000270061 TIMM13Q9Y5L4 95 aaPredicted RBP26.01■■□□□ 1.75
SSBP4-201ENST00000270061 WDR27A2RRH5 827 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 TADA3O75528 432 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 ABLIM3O94929 683 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 UNGP13051 313 aaPredicted RBP26■■□□□ 1.75
SSBP4-201ENST00000270061 TCP1P17987 556 aaKnown RBP26■■□□□ 1.75
SSBP4-201ENST00000270061 ABCB4P21439 1286 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 GNA15P30679 374 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 MEI1Q5TIA1 1274 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 LRRN4CLQ8ND94 238 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 TSC2P49815 1807 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 XYLBO75191 536 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 CYP1A1P04798 512 aaPredicted RBP26■■□□□ 1.75
SSBP4-201ENST00000270061 POLR2BP30876 1174 aaKnown RBP26■■□□□ 1.75
SSBP4-201ENST00000270061 ELF1P32519 619 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 SYCE1Q8N0S2 351 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 ARHGEF26Q96DR7 871 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 CYP3A43Q9HB55 503 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 LIMD1Q9UGP4 676 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 POLIQ9UNA4 740 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 HYOU1Q9Y4L1 999 aa26■■□□□ 1.75
SSBP4-201ENST00000270061 PRR33A8MZF0 331 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 CCL16O15467 120 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 OAZ2O95190 189 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 P4HA1P13674 534 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 ATF2P15336 505 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 ZXDAP98168 799 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 WDR72Q3MJ13 1102 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 PPP1R2P3Q6NXS1 205 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 SENP8Q96LD8 212 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 OXCT2Q9BYC2 517 aaPredicted RBP25.99■■□□□ 1.75
SSBP4-201ENST00000270061 AGAP1Q9UPQ3 857 aa25.99■■□□□ 1.75
SSBP4-201ENST00000270061 NOTCH4Q99466 2003 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 ARHGEF37A1IGU5 675 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 SPTLC1O15269 473 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 ODC1P11926 461 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 TUBB4BP68371 445 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 TPGS2Q68CL5 300 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 HPDLQ96IR7 371 aa25.98■■□□□ 1.75
SSBP4-201ENST00000270061 NXF1Q9UBU9 619 aaKnown RBP25.98■■□□□ 1.75
SSBP4-201ENST00000270061 PRRG1O14668 218 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 MTA2O94776 668 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 CPB1P15086 417 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 TYMPP19971 482 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 GBP2P32456 591 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-201ENST00000270061 TAF6P49848 677 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 GRASPQ7Z6J2 395 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-201ENST00000270061 ZNF606Q8WXB4 792 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 GTF3C4Q9UKN8 822 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 SORCS3Q9UPU3 1222 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 CYP1A2P05177 515 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 CENPCQ03188 943 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 OVOS1Q6IE37 1185 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 UBE2Q2Q8WVN8 375 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 OSBPL9Q96SU4 736 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 OSGEPQ9NPF4 335 aa25.97■■□□□ 1.75
SSBP4-201ENST00000270061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.97■■□□□ 1.759e-7■■■■□ 19.7
SSBP4-201ENST00000270061 SRGAP2O75044 1071 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 CALCAP01258 141 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 ASGR2P07307 311 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 POU2F2P09086 479 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 CD58P19256 250 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 CKAP4Q07065 602 aaKnown RBP25.96■■□□□ 1.75
SSBP4-201ENST00000270061 RSRC2Q7L4I2 434 aaKnown RBP25.96■■□□□ 1.75
SSBP4-201ENST00000270061 GET4Q7L5D6 327 aaPredicted RBP25.96■■□□□ 1.75
SSBP4-201ENST00000270061 TTC39CQ8N584 583 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 TSC1Q92574 1164 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 CYP4F11Q9HBI6 524 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 ABCB6Q9NP58 842 aa25.96■■□□□ 1.75
SSBP4-201ENST00000270061 THAP12O43422 761 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 FTCDO95954 541 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 ADCY1Q08828 1119 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 MTMR3Q13615 1198 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 TRIM67Q6ZTA4 783 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 TCEAL8Q8IYN2 117 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 LRRC52Q8N7C0 313 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 TRIM11Q96F44 468 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 ZNF560Q96MR9 790 aa25.95■■□□□ 1.75
SSBP4-201ENST00000270061 AFF4Q9UHB7 1163 aaKnown RBP25.95■■□□□ 1.75
SSBP4-201ENST00000270061 ZDBF2Q9HCK1 2354 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 OR6C75A6NL08 312 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 LRG1P02750 347 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 PAEPP09466 180 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 MYBL1P10243 752 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 PNPLA4P41247 253 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 MYO1EQ12965 1108 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 NAA30Q147X3 362 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-201ENST00000270061 SV2CQ496J9 727 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 SCARA5Q6ZMJ2 495 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 CREG2Q8IUH2 290 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 UBXN4Q92575 508 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms