RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 ACADSBP45954 432 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SNX16P57768 344 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SMTNL2Q2TAL5 461 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 ZNF572Q7Z3I7 529 aaPredicted RBP16.94■□□□□ 0.3
PCTP-201ENST00000268896 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 ARFGAP1Q8N6T3 406 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 KHSRPQ92945 711 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCTP-201ENST00000268896 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 RPGRIP1Q96KN7 1286 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 PGLYRP2Q96PD5 576 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 KRT12Q99456 494 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCTP-201ENST00000268896 C2CD4BA6NLJ0 364 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 LRCH4O75427 683 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 ALDH7A1P49419 539 aaKnown RBP16.94■□□□□ 0.3
PCTP-201ENST00000268896 TKTL1P51854 596 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SPATA2LQ8IUW3 424 aaPredicted RBP16.94■□□□□ 0.3
PCTP-201ENST00000268896 BADQ92934 168 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 RNF25Q96BH1 459 aaPredicted RBP16.94■□□□□ 0.3
PCTP-201ENST00000268896 FAM149B1Q96BN6 582 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 CWH43Q9H720 699 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 ABI2Q9NYB9 513 aaPredicted RBP16.94■□□□□ 0.3
PCTP-201ENST00000268896 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
PCTP-201ENST00000268896 SF3B1O75533 1304 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCTP-201ENST00000268896 LTBP2Q14767 1821 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 TCRBV7S2A1N4TA0A589 114 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 PSTPIP1O43586 416 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 CYP2F1P24903 491 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 IFRD2Q12894 506 aaPredicted RBP16.93■□□□□ 0.3
PCTP-201ENST00000268896 KCNT1Q5JUK3 1230 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 RTP2Q5QGT7 225 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 LRRC1Q9BTT6 524 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 ULBP1Q9BZM6 244 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 ANKZF1Q9H8Y5 726 aa16.93■□□□□ 0.3
PCTP-201ENST00000268896 SYN3O14994 580 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 OAZ2O95190 189 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 KRT1P04264 644 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 SYN1P17600 705 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 TFE3P19532 575 aaPredicted RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 IL1R2P27930 398 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 RPL34P49207 117 aaKnown RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 ZNF143P52747 638 aaPredicted RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 ADCY1Q08828 1119 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 CCDC14Q49A88 953 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 UBE2Q1Q7Z7E8 422 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 NIPA2Q8N8Q9 360 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 STKLD1Q8NE28 680 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 FNIP1Q8TF40 1166 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 ASNSD1Q9NWL6 643 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 ZMYND10O75800 440 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 RNF8O76064 485 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 USP17L7P0C7H9 530 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 SLC7A5Q01650 507 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 BTG3Q14201 252 aaPredicted RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 PRSS55Q6UWB4 352 aaPredicted RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 FAM43BQ6ZT52 329 aaPredicted RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 ANKS1BQ7Z6G8 1248 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 ZDHHC17Q8IUH5 632 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 SCN4BQ8IWT1 228 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 PNKPQ96T60 521 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 HERPUD2Q9BSE4 406 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 HEMGNQ9BXL5 484 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 ZCWPW1Q9H0M4 648 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 DDX47Q9H0S4 455 aaKnown RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 IL23AQ9NPF7 189 aa16.92■□□□□ 0.3
PCTP-201ENST00000268896 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
PCTP-201ENST00000268896 ALPK3Q96L96 1907 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 COL4A6Q14031 1691 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 FGFR3P22607 806 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 MIPP30301 263 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 SDC4P31431 198 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 GRIK1P39086 918 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 CLCN6P51797 869 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 MRPS5P82675 430 aaKnown RBP16.91■□□□□ 0.3
PCTP-201ENST00000268896 MAPRE1Q15691 268 aaKnown RBP16.91■□□□□ 0.3
PCTP-201ENST00000268896 ODF2Q5BJF6 829 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 SDHAF4Q5VUM1 108 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 ZNF280DQ6N043 979 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 SCYL2Q6P3W7 929 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 MMGT1Q8N4V1 131 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 FAM172AQ8WUF8 416 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 HDAC7Q8WUI4 952 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 KCTD13Q8WZ19 329 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 CNPY3Q9BT09 278 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 CYLDQ9NQC7 956 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
PCTP-201ENST00000268896 ARGLU1Q9NWB6 273 aaPredicted RBP16.91■□□□□ 0.3
PCTP-201ENST00000268896 LCMT1Q9UIC8 334 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms