RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 AGO2Q9UKV8 859 aaKnown RBP16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 WDR91A4D1P6 747 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GSC2O15499 205 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PRPF4O43172 522 aaKnown RBP eCLIP16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CCDC22O60826 627 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAGEA4P43358 317 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 NEK3P51956 506 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RTP1P59025 263 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 LMNB2Q03252 620 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 LSAMPQ13449 338 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 FAM110CQ1W6H9 321 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TAPT1Q6NXT6 567 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PLEKHH3Q7Z736 793 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HIC2Q96JB3 615 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAML3Q96JK9 1138 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SMC6Q96SB8 1091 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 BTBD10Q9BSF8 475 aa16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
MAP1LC3B-201ENST00000268607 C2CD2LO14523 706 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ICAM3P32942 547 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CEP128Q6ZU80 1094 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RFX8Q6ZV50 586 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RFWD2Q8NHY2 731 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CPA5Q8WXQ8 436 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZNF75CPQ92670 426 aaPredicted RBP16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TUBGCP5Q96RT8 1024 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GPR20Q99678 358 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RNPEPQ9H4A4 650 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SAR1AQ9NR31 198 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 A0A1W2PPM1 405 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GYG2O15488 501 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SLC10A3P09131 477 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GARTP22102 1010 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 WDR72Q3MJ13 1102 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CELF3Q5SZQ8 465 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TDRD10Q5VZ19 366 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 METTL7BQ6UX53 244 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PPFIBP2Q8ND30 876 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HAPLN3Q96S86 360 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PLVAPQ9BX97 442 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 DHX33Q9H6R0 707 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 WASF2Q9Y6W5 498 aa16.68■□□□□ 0.26
MAP1LC3B-201ENST00000268607 EXTL3O43909 919 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 STAM2O75886 525 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CYP1A2P05177 515 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CFHP08603 1231 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 AP1B1Q10567 949 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAPK6Q16659 721 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 LIN52Q52LA3 116 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 DAB2IPQ5VWQ8 1189 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 LVRNQ6Q4G3 990 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SYDE1Q6ZW31 735 aaPredicted RBP16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZBTB33Q86T24 672 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 DDX1Q92499 740 aaKnown RBP16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MCUR1Q96AQ8 359 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PRR11Q96HE9 360 aaPredicted RBP16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PHACTR1Q9C0D0 580 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SAYSD1Q9NPB0 183 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TLL2Q9Y6L7 1015 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 A0A0G2JND7 137 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PMM2O15305 246 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAP3K7O43318 606 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 DESP17661 470 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ERFP50548 548 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 FYB2Q5VWT5 728 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SEPT1Q8WYJ6 367 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 STMN2Q93045 179 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MSTO1Q9BUK6 570 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SYNCQ9H7C4 482 aa16.67■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ATG7O95352 703 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SRGAP2CP0DJJ0 459 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GZMAP12544 262 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZRSR2Q15696 482 aaKnown RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SPDYAQ5MJ70 313 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAMDC4Q6UXC1 1216 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RINLQ6ZS11 566 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 USP37Q86T82 979 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PASD1Q8IV76 773 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 RBAKQ9NYW8 714 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SMG5Q9UPR3 1016 aaKnown RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TRPM7Q96QT4 1865 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 A6NJR5 290 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TMEM88BA6NKF7 163 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HAUS5O94927 633 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms