RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 CCDC24Q8N4L8 307 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MREGQ8N565 214 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 USP38Q8NB14 1042 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 SP110Q9HB58 689 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 AGPAT5Q9NUQ2 364 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TRIM10Q9UDY6 481 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 USP31Q70CQ4 1352 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZNF609O15014 1411 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 C3orf70A6NLC5 250 aaPredicted RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 TRIM24O15164 1050 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 FYNP06241 537 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SNRPAP09012 282 aaKnown RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 TTC27Q6P3X3 843 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 C3orf62Q6ZUJ4 267 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ZNF677Q86XU0 584 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 THEM5Q8N1Q8 247 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 GCNAQ96QF7 691 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 LRMDAQ9H2I8 198 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 RBAKQ9NYW8 714 aaPredicted RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 PLAGL2Q9UPG8 496 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 NCKAP1LP55160 1127 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 PTK7Q13308 1070 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ERMARDQ5T6L9 678 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SNX32Q86XE0 403 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 LXNQ9BS40 222 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 PHF20Q9BVI0 1012 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 PPME1Q9Y570 386 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SLIT1O75093 1534 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 MAGEB16A2A368 324 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 CENPCQ03188 943 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 STILQ15468 1287 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 TRIM69Q86WT6 500 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SULF1Q8IWU6 871 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 GPD1LQ8N335 351 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ENGASEQ8NFI3 743 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 C18orf8Q96DM3 657 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ZNF341Q9BYN7 854 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 GRID1Q9ULK0 1009 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 FCER1AP12319 257 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 KCNA1Q09470 495 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 IGDCC4Q8TDY8 1250 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 IFT43Q96FT9 208 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 WNK4Q96J92 1243 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 EPS8L2Q9H6S3 715 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 DNM1LO00429 736 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 RTP1P59025 263 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 C1orf54Q8WWF1 131 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SEC31BQ9NQW1 1179 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 SAR1AQ9NR31 198 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ETNK2Q9NVF9 386 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 UMODL1Q5DID0 1318 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 NPEPPSP55786 919 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 ZNF200P98182 395 aaPredicted RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 ZNF268Q14587 947 aaPredicted RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 ERFEQ4G0M1 354 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 TMEM237Q96Q45 408 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 APOL6Q9BWW8 343 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 TRIM54Q9BYV2 358 aa5.9□□□□□ -1.46
VCAN-201ENST00000265077 AGO2Q9UKV8 859 aaKnown RBP5.9□□□□□ -1.46
VCAN-201ENST00000265077 PI4K2BG5E9Z4 385 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 FBP2O00757 339 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 EFCAB14O75071 495 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MYL2P10916 166 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 PSMA4P25789 261 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 MAGEA4P43358 317 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 CSE1LP55060 971 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 ACTR2P61160 394 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 SLC10A5Q5PT55 438 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 DCPSQ96C86 337 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 FBXO40Q9UH90 709 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 DMGDHQ9UI17 866 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 MAD2L2Q9UI95 211 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 PDZK1P1A8MUH7 402 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 EIF3EP60228 445 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 EFHC2Q5JST6 749 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 NUP93Q8N1F7 819 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 GOLM1Q8NBJ4 401 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 PPHLN1Q8NEY8 458 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 CEP95Q96GE4 821 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MED15Q96RN5 788 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 SENP7Q9BQF6 1050 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 E5RI56 91 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 CPA2P48052 419 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 GALCP54803 685 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 RPS6P62753 249 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 TRAF2Q12933 501 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MAPK7Q13164 816 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 LVRNQ6Q4G3 990 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MLPHQ9BV36 600 aaPredicted RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 RSPH9Q9H1X1 276 aaPredicted RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 JPH1Q9HDC5 661 aaPredicted RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 DBR1Q9UK59 544 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 CACNA1IQ9P0X4 2223 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 F8W810 466 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms