RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SPECC1L-ADORA2AF8WAN1 911 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 CXCL11O14625 94 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 LIASO43766 372 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 GNL1P36915 607 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-201ENST00000264723 PTPN11Q06124 597 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-201ENST00000264723 CHI3L2Q15782 390 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 PREPLQ4J6C6 727 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-201ENST00000264723 WDR49Q8IV35 697 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 LRFN2Q9ULH4 789 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 ADGRA3Q8IWK6 1321 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 ATP9BO43861 1147 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 NOVP48745 357 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 RCN1Q15293 331 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 SPATA31C2B4DYI2 1134 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 C1QBPQ07021 282 aaKnown RBP20.65■□□□□ 0.9
CSPG5-201ENST00000264723 MORF4L2Q15014 288 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 C15orf59Q2T9L4 293 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-201ENST00000264723 GRAMD1BQ3KR37 738 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 TXNRD3NBQ6F5E7 133 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 ZNF516Q92618 1163 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 SLITRK1Q96PX8 696 aa20.65■□□□□ 0.9
CSPG5-201ENST00000264723 COL4A1P02462 1669 aa20.64■□□□□ 0.9
CSPG5-201ENST00000264723 GAS2O43903 313 aaKnown RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 RASSF9O75901 435 aa20.64■□□□□ 0.9
CSPG5-201ENST00000264723 FAAP100Q0VG06 881 aa20.64■□□□□ 0.9
CSPG5-201ENST00000264723 WDR75Q8IWA0 830 aaKnown RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 BRSK2Q8IWQ3 736 aa20.64■□□□□ 0.9
CSPG5-201ENST00000264723 ZC3H3Q8IXZ2 948 aaKnown RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 ZCCHC9Q8N567 271 aaKnown RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 TIMM13Q9Y5L4 95 aaPredicted RBP20.64■□□□□ 0.9
CSPG5-201ENST00000264723 LACTBL1A8MY62 500 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 DHX15O43143 795 aaKnown RBP20.64■□□□□ 0.89
CSPG5-201ENST00000264723 GPD1P21695 349 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 THOC5Q13769 683 aaKnown RBP20.64■□□□□ 0.89
CSPG5-201ENST00000264723 PRPSAP1Q14558 356 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 ZCCHC23Q6ZST2 131 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 SLC25A41Q8N5S1 370 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 DDX27Q96GQ7 796 aaKnown RBP20.64■□□□□ 0.89
CSPG5-201ENST00000264723 APOBEC3GQ9HC16 384 aaKnown RBP20.64■□□□□ 0.89
CSPG5-201ENST00000264723 SCOCQ9UIL1 159 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 USP18Q9UMW8 372 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 ACKR2O00590 384 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 SERPINB3P29508 390 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 MMP14P50281 582 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 SLC1A5Q15758 541 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 NOTUMQ6P988 496 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 JOSD2Q8TAC2 188 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 ZNF317Q96PQ6 595 aaPredicted RBP20.64■□□□□ 0.89
CSPG5-201ENST00000264723 GGA2Q9UJY4 613 aa20.64■□□□□ 0.89
CSPG5-201ENST00000264723 KBTBD13C9JR72 458 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 SULT1E1P49888 294 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 MTFR1Q15390 333 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 EFHC2Q5JST6 749 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 ECHDC2Q86YB7 292 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 RIOX2Q8IUF8 465 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 KATNAL2Q8IYT4 538 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 SLC26A7Q8TE54 656 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 RXFP2Q8WXD0 754 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 GBA2Q9HCG7 927 aaPredicted RBP20.63■□□□□ 0.89
CSPG5-201ENST00000264723 C15orf41Q9Y2V0 281 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 CCDC22O60826 627 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 XRCC4Q13426 336 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 C4orf50Q6ZRC1 276 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 USP33Q8TEY7 942 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 DNAJB3Q8WWF6 145 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 MFSD14AQ96MC6 490 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 PLA2G6O60733 806 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 TYK2P29597 1187 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 NDST1P52848 882 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 KIAA0319LQ8IZA0 1049 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 XPNPEP1Q9NQW7 623 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 DLGAP2Q9P1A6 1054 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 KAT6AQ92794 2004 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 TAC1P20366 129 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 MIPP30301 263 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 FOXN2P32314 431 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 GARSP41250 739 aaKnown RBP20.63■□□□□ 0.89
CSPG5-201ENST00000264723 KBTBD12Q3ZCT8 623 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 JADE1Q6IE81 842 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 VSTM1Q6UX27 236 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 RGS9BPQ6ZS82 235 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 PLEKHH3Q7Z736 793 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 FAM131BQ86XD5 332 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 HASPINQ8TF76 798 aa20.63■□□□□ 0.89
CSPG5-201ENST00000264723 POU5F1Q01860 360 aaKnown RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 ZNF484Q5JVG2 852 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 SWT1Q5T5J6 900 aaKnown RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 HERPUD2Q9BSE4 406 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 BTBD7Q9P203 1132 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 TLK1Q9UKI8 766 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 KCNA2P16389 499 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 ACAT1P24752 427 aaKnown RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 MPP2Q14168 576 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 C6orf89Q6UWU4 347 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 ABHD15Q6UXT9 468 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 RIBC1Q8N443 379 aaPredicted RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 DNAJC9Q8WXX5 260 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms