RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CSDE1O75534 798 aaKnown RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 TYK2P29597 1187 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 SV2AQ7L0J3 742 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 EMC1Q8N766 993 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 STKLD1Q8NE28 680 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 TTLL3Q9Y4R7 772 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 LMTK3Q96Q04 1460 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
GPC1-201ENST00000264039 KCNN4O15554 427 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 EEF1DP29692 281 aaKnown RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 FDFT1P37268 417 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 FNBP1LQ5T0N5 605 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 NDEL1Q9GZM8 345 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 SLITRK3O94933 977 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 CYP1B1Q16678 543 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 CLEC16AQ2KHT3 1053 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 C6orf183Q5T699 404 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 TMEM79Q9BSE2 394 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
GPC1-201ENST00000264039 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 BCL9LQ86UU0 1499 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 E5RJQ4 531 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 KLHL2O95198 593 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 TCF4P15884 667 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 AP3B2Q13367 1082 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 ZNF398Q8TD17 642 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 DCUN1D1Q96GG9 259 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 PARVAQ9NVD7 372 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 PCDHB2Q9Y5E7 798 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 C1orf232A0A0U1RR37 186 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 LIASO43766 372 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 GRAP2O75791 330 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 ALAS1P13196 640 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 PLOD1Q02809 727 aaPredicted RBP16.91■□□□□ 0.3
GPC1-201ENST00000264039 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
GPC1-201ENST00000264039 FASTKD1Q53R41 847 aaKnown RBP16.91■□□□□ 0.3
GPC1-201ENST00000264039 PDPK2PQ6A1A2 396 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 CD209Q9NNX6 404 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 PTTG2Q9NZH5 202 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 SEL1LQ9UBV2 794 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 SYNJ2BP-COX16A0A087WUM0 186 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 CYP1A2P05177 515 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 MAP4P27816 1152 aaKnown RBP16.91■□□□□ 0.3
GPC1-201ENST00000264039 VCPP55072 806 aaKnown RBP16.91■□□□□ 0.3
GPC1-201ENST00000264039 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 SPOCD1Q6ZMY3 1216 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 CCNYL1Q8N7R7 359 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 CEP170P1Q96L14 293 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 COX16Q9P0S2 106 aa16.91■□□□□ 0.3
GPC1-201ENST00000264039 IVDP26440 423 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 STT3AP46977 705 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 CYP2R1Q6VVX0 501 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 FAM156AQ8NDB6 213 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 CASP10Q92851 521 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 MARK4Q96L34 752 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 TRNAU1APQ9NX07 287 aaKnown RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 KCNK4Q9NYG8 393 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 ALOX15BO15296 676 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 CCDC166P0CW27 439 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 FDX1P10109 184 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 MUTP22033 750 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 CDH6P55285 790 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ORC1Q13415 861 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 TTC39BQ5VTQ0 682 aaPredicted RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 RHBDF2Q6PJF5 856 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ADAM32Q8TC27 787 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ZNF668Q96K58 619 aaPredicted RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 ADAMTS6Q9UKP5 1117 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 NUMBLQ9Y6R0 609 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 RGPD2P0DJD1 1756 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 AKAP10O43572 662 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ABCG1P45844 678 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 ITGA9Q13797 1035 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 SIX1Q15475 284 aaPredicted RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 FSCBQ5H9T9 825 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 TSPAN14Q8NG11 270 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 DENND1AQ8TEH3 1009 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 FAM172AQ8WUF8 416 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 CYGBQ8WWM9 190 aa16.9■□□□□ 0.3
GPC1-201ENST00000264039 UNKQ9C0B0 810 aaKnown RBP16.9■□□□□ 0.3
GPC1-201ENST00000264039 TCRBV9S1A1TA0A576 114 aa16.89■□□□□ 0.29
GPC1-201ENST00000264039 F8W8V4 182 aa16.89■□□□□ 0.29
GPC1-201ENST00000264039 GMNNO75496 209 aa16.89■□□□□ 0.29
GPC1-201ENST00000264039 ARP10275 920 aa16.89■□□□□ 0.29
GPC1-201ENST00000264039 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
GPC1-201ENST00000264039 FAM71AQ8IYT1 594 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms