RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM213AQ9BRX8 229 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ZNF518BQ9C0D4 1074 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 RBBP6Q7Z6E9 1792 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 TRIM49D1C9J1S8 452 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 HNRNPDLO14979 420 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ELK3P41970 407 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 JAK3P52333 1124 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 CHI3L2Q15782 390 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 FBXO27Q8NI29 283 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 GFM2Q969S9 779 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 WDR83Q9BRX9 315 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 F8VP50 259 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 KRT38O76015 456 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 USP1O94782 785 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ITGA2BP08514 1039 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 HSPA2P54652 639 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 SLC26A7Q8TE54 656 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 MPP4Q96JB8 637 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 THAP1Q9NVV9 213 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 ITGA11Q9UKX5 1188 aa12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 HBS1LQ9Y450 684 aaKnown RBP12.9□□□□□ -0.34
CHMP2B-201ENST00000263780 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 E5RJQ4 531 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 MCF2LO15068 1137 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CST8O60676 142 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PLA2G6O60733 806 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PFDN1O60925 122 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 MYL4P12829 197 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ETS2P15036 469 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 DESP17661 470 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SFNP31947 248 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CPOXP36551 454 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CCNFP41002 786 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 COPAP53621 1224 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 BASP1P80723 227 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ARHGAP8P85298 464 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 GAD2Q05329 585 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 STX3Q13277 289 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ANO5Q75V66 913 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TRIM73Q86UV7 250 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 GSTCDQ8NEC7 633 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PKD2L1Q9P0L9 805 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 MAD1L1Q9Y6D9 718 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TEX264Q9Y6I9 313 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 A6NJR5 290 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SDR42E2A6NKP2 422 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CASQ2O14958 399 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TMEM63AO94886 807 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 CFHP08603 1231 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TCF4P15884 667 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 HSF5Q4G112 596 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 NLRP4Q96MN2 994 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 DHX33Q9H6R0 707 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 TIMMDC1Q9NPL8 285 aa12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 DNAAF2Q9NVR5 837 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ASTN2O75129 1339 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-201ENST00000263780 ARHGAP10A1A4S6 786 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 PIAS1O75925 651 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 SH3BP5LQ7L8J4 393 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 SATL1Q86VE3 508 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms