RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CPT1AP50416 773 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 GLB1LQ6UWU2 654 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 CCDC149Q6ZUS6 474 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 YIPF2Q9BWQ6 316 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 CTNNAL1Q9UBT7 734 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 KCNJ1P48048 391 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 POLD3Q15054 466 aaPredicted RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 EFCAB12Q6NXP0 572 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SEPT1Q8WYJ6 367 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 TRIM63Q969Q1 353 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 PRRG3Q9BZD7 231 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 DENND1BQ6P3S1 775 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RAET1EQ8TD07 263 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 OLFM1Q99784 485 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 VCPKMTQ9H867 229 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 NAGPAQ9UK23 515 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 ANKRD26Q9UPS8 1709 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RRN3P2A6NIE6 340 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 CHRNB3Q05901 458 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 MKRN4PQ13434 485 aaPredicted RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 FAM111AQ96PZ2 611 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SEPT5Q99719 369 aaPredicted RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 PDZK1P1A8MUH7 402 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 PON1P27169 355 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 MAPK1P28482 360 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 MMRN1Q13201 1228 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 V9GYQ6 96 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 IQCA1LA6NCM1 817 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 SLC25A41Q8N5S1 370 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 C19orf18Q8NEA5 215 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 HBP1O60381 514 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 NDUFA5Q16718 116 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 ACTRT1Q8TDG2 376 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 USP33Q8TEY7 942 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 ZSWIM1Q9BR11 485 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PHKG1Q16816 387 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 TAF2Q6P1X5 1199 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 KRT78Q8N1N4 520 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 E2F8A0AVK6 867 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 KLRC1P26715 233 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 HNRNPH1P31943 449 aaKnown RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PLA2G4FQ68DD2 849 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 GLMNQ92990 594 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 HEY2Q9UBP5 337 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 NINQ8N4C6 2090 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 H7C0S8 307 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 CHI3L1P36222 383 aaPredicted RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 C1DQ13901 141 aaKnown RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 KRT77Q7Z794 578 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 CENPLQ8N0S6 344 aaPredicted RBP18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 MYCBPAPQ8TBZ2 947 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PCDHB7Q9Y5E2 793 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 ALDH1A2O94788 518 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 RARBP10826 455 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 TALDO1P37837 337 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 PPP1R3GB7ZBB8 358 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 SLC16A1P53985 500 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 CASP10Q92851 521 aa18.06■□□□□ 0.48
NOTCH3-201ENST00000263388 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 FAM45BPQ6NSW5 357 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 AGPAT3Q9NRZ7 376 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 TRMT5Q32P41 509 aaKnown RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 TSEN34Q9BSV6 310 aaKnown RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 BAATQ14032 418 aaPredicted RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 OTOAQ7RTW8 1153 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 CRLS1Q9UJA2 301 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 BAZ2AQ9UIF9 1905 aaKnown RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 KBTBD13C9JR72 458 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 TRIM24O15164 1050 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 GALNTL6Q49A17 601 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 MDM1Q8TC05 714 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 CRAMP1Q96RY5 1269 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 SEC24CP53992 1094 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 SDE2Q6IQ49 451 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 CHMP1BQ7LBR1 199 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 RPS6KA5O75582 802 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 ZCWPW1Q9H0M4 648 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 USP18Q9UMW8 372 aa18.05■□□□□ 0.48
NOTCH3-201ENST00000263388 ZC3H11AO75152 810 aaKnown RBP eCLIP18.04■□□□□ 0.48
NOTCH3-201ENST00000263388 RARGP13631 454 aa18.04■□□□□ 0.48
NOTCH3-201ENST00000263388 HHIPL2Q6UWX4 724 aa18.04■□□□□ 0.48
NOTCH3-201ENST00000263388 ATP6V0D2Q8N8Y2 350 aa18.04■□□□□ 0.48
NOTCH3-201ENST00000263388 CASKIN2Q8WXE0 1202 aa18.04■□□□□ 0.48
NOTCH3-201ENST00000263388 SPACA6W5XKT8 324 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms