RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ATAT1Q5SQI0 421 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 WDR59Q6PJI9 974 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 ZNF571Q7Z3V5 609 aaPredicted RBP17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 GRASPQ7Z6J2 395 aaPredicted RBP17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 STK32AQ8WU08 396 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 HSFY1Q96LI6 401 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 CORO1BQ9BR76 489 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 TTLL2Q9BWV7 592 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 CDH22Q9UJ99 828 aa17.54■□□□□ 0.4
CHCHD3-201ENST00000262570 FAM92AA1XBS5 289 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 RTN3O95197 1032 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 LSM8O95777 96 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 CYP1A1P04798 512 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 SERPING1P05155 500 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 RHOP08100 348 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 TMC8Q8IU68 726 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 HS6ST3Q8IZP7 471 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 TMEM35BQ8NCS4 154 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 C1orf131Q8NDD1 294 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 OLIG1Q8TAK6 271 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 SUSD6Q92537 303 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 PCDHB18PQ96TA0 734 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 AVENQ9NQS1 362 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 PRDM6Q9NQX0 595 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 ASAH2Q9NR71 780 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 EHD2Q9NZN4 543 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 IMPACTQ9P2X3 320 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 MAGED2Q9UNF1 606 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 CEP83Q9Y592 693 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 USP3Q9Y6I4 520 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 GABBR2O75899 941 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 TSR1Q2NL82 804 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 LEXMQ3ZCV2 418 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 PABPC1LQ4VXU2 614 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 TRIM72Q6ZMU5 477 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 SPC24Q8NBT2 197 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 RIPOR3Q96MK2 946 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 FBXO44Q9H4M3 255 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 ARHGAP20Q9P2F6 1191 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 UXTQ9UBK9 157 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 C5orf42Q9H799 3197 aa17.53■□□□□ 0.4
CHCHD3-201ENST00000262570 UNGP13051 313 aaPredicted RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 TNFAIP3P21580 790 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 YWHAQP27348 245 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 MTHFRP42898 656 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 RGS7P49802 495 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 TKTL1P51854 596 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 NOMO3P69849 1222 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 NTHL1P78549 312 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 IFRD2Q12894 506 aaPredicted RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 PDCLQ13371 301 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 SMAD4Q13485 552 aaKnown RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 TDRD12Q587J7 1177 aaKnown RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 CYP4A22Q5TCH4 519 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 GAREM2Q75VX8 874 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 TMEM110Q86TL2 294 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 LRRC4Q9HBW1 653 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 CYLDQ9NQC7 956 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 ST7Q9NRC1 585 aa17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 USP15Q9Y4E8 981 aaPredicted RBP17.52■□□□□ 0.39
CHCHD3-201ENST00000262570 MYH10P35580 1976 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 GRXCR2A6NFK2 248 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 MBTPS2O43462 519 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 F11P03951 625 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 PLEKP08567 350 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 CCR2P41597 374 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 ACADSBP45954 432 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 TAF10Q12962 218 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 PRSS36Q5K4E3 855 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 PDZD4Q76G19 769 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 TMEM150AQ86TG1 271 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 PPP1R13BQ96KQ4 1090 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 NECTIN4Q96NY8 510 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 NOX5Q96PH1 765 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 CPXM1Q96SM3 734 aa17.51■□□□□ 0.39
CHCHD3-201ENST00000262570 FGF19O95750 216 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 MYL4P12829 197 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 GABRR2P28476 465 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CDK17Q00537 523 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 TFF2Q03403 129 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 ADIGQ0VDE8 80 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CBX2Q14781 532 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CLEC16AQ2KHT3 1053 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SLC5A9Q2M3M2 681 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 NAA35Q5VZE5 725 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 PM20D1Q6GTS8 502 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SCML4Q8N228 414 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SLC30A5Q8TAD4 765 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms