RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 KIFC3Q9BVG8 833 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 KRT14P02533 472 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ITGB3P05106 788 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 FAM200BP0CF97 657 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 RBP3P10745 1247 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 RPL10AP62906 217 aaKnown RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 COLEC11Q9BWP8 271 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 CNGB3Q9NQW8 809 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 CDH9Q9ULB4 789 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SUFUQ9UMX1 484 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ARHGAP42A6NI28 874 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 RAD51CO43502 376 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 PPARGP37231 505 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 PTK7Q13308 1070 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 PTPN21Q16825 1174 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 IQCKQ8N0W5 287 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ARHGAP24Q8N264 748 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 DPF3Q92784 378 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 DPH5Q9H2P9 285 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 KPNA7A9QM74 516 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 H7C4K7 107 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 GNGT2O14610 69 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 MDM4O15151 490 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 PPFIA2O75334 1257 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 CXCL8P10145 99 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SKOR1P84550 965 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 PTK2BQ14289 1009 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ANO4Q32M45 955 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 FUBP3Q96I24 572 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 DDX50Q9BQ39 737 aaKnown RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 RNPEPQ9H4A4 650 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SNX24Q9Y343 169 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ADGRA2Q96PE1 1338 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF33AQ06730 810 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 TUSC3Q13454 348 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 LRRC31Q6UY01 552 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 SPOCD1Q6ZMY3 1216 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 FRA10AC1Q70Z53 315 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 ADAT2Q7Z6V5 191 aaKnown RBP8.58□□□□□ -1.04
PTPN3-201ENST00000262539 MCRS1Q96EZ8 462 aa8.58□□□□□ -1.04
PTPN3-201ENST00000262539 TMEM88BA6NKF7 163 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 STX2P32856 288 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 RASSF2P50749 326 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 KDM7AQ6ZMT4 941 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SLC20A1Q8WUM9 679 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CABS1Q96KC9 395 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 RMDN2Q96LZ7 410 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 PDZD7Q9H5P4 517 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 TXNRD2Q9NNW7 524 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 XPNPEP3Q9NQH7 507 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 AMACRQ9UHK6 382 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 BAZ2AQ9UIF9 1905 aaKnown RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 OR6C75A6NL08 312 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 UPP2O95045 317 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ACO1P21399 889 aaKnown RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF132P52740 706 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 YWHAGP61981 247 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SP3Q02447 781 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 PDE1CQ14123 709 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 DBN1Q16643 649 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SLAIN1Q8ND83 568 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SNX19Q92543 992 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 EXT2Q93063 718 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 TATDN2Q93075 761 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SH3KBP1Q96B97 665 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 PCYT2Q99447 389 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CLUHO75153 1309 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 NCK2O43639 380 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 APOEP02649 317 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 MMEP08473 750 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ACTR5Q9H9F9 607 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 BCAP29Q9UHQ4 241 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CNTFP26441 200 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 YWHAZP63104 245 aaKnown RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 FSTL1Q12841 308 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 DUPD1Q68J44 220 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 MON1BQ7L1V2 547 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 LINC01465Q8N7H1 131 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 PBXIP1Q96AQ6 731 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SPDL1Q96EA4 605 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CALN1Q9BXU9 219 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 STXBP5LQ9Y2K9 1186 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 MYH1P12882 1939 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 GOLGA8QA0A0J9YX86 632 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 GOLGA8OA6NCC3 632 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 GOLGA8NF8WBI6 632 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 TSPAN1O60635 241 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CNMDO75829 334 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms