RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CFAP221Q4G0U5 840 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 NDRG1Q92597 394 aaKnown RBP28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 FNIP2Q9P278 1114 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 MYO1AQ9UBC5 1043 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 H2AFZP0C0S5 128 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 LCP1P13796 627 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 NDUFV1P49821 464 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 KRT83P78385 493 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 RAB33AQ14088 237 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 H2AFVQ71UI9 128 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 PHF13Q86YI8 300 aaPredicted RBP28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 ZNF461Q8TAF7 563 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 CLEC4CQ8WTT0 213 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 OXCT2Q9BYC2 517 aaPredicted RBP28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 LZTFL1Q9NQ48 299 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 ZNF446Q9NWS9 450 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 DONSONQ9NYP3 566 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 STK39Q9UEW8 545 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 ATG2AQ2TAZ0 1938 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 HHLA1C9JL84 531 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 XPO1O14980 1071 aaKnown RBP28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 PER2O15055 1255 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 ABLIM3O94929 683 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 SETSIPP0DME0 302 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 RRM1P23921 792 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 VAV2P52735 878 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 ADGRD2Q7Z7M1 963 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 RBM23Q86U06 439 aaKnown RBP28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 ZNF653Q96CK0 615 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 PIWIL1Q96J94 861 aaKnown RBP28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 MIS12Q9H081 205 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 CSNK1G1Q9HCP0 422 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 DMAP1Q9NPF5 467 aaPredicted RBP28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 PSD3Q9NYI0 1048 aa28.96■■■□□ 2.23
SMARCD3-201ENST00000262188 TGM5O43548 720 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 KLRC2P26717 231 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 PLA2G4AP47712 749 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 IFRD2Q12894 506 aaPredicted RBP28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 SYT10Q6XYQ8 523 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 SYNCQ9H7C4 482 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 CYP4F11Q9HBI6 524 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 SALL4Q9UJQ4 1053 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 JRKLQ9Y4A0 524 aa28.95■■■□□ 2.23
SMARCD3-201ENST00000262188 REV3LO60673 3130 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 ATP8B3O60423 1300 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 SATB1Q01826 763 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 SWT1Q5T5J6 900 aaKnown RBP28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 CCDC91Q7Z6B0 441 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 REXO1L1PQ8IX06 675 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 SCUBE3Q8IX30 993 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 FUBP3Q96I24 572 aaKnown RBP eCLIP28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 SLC4A5Q9BY07 1137 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 AFF4Q9UHB7 1163 aaKnown RBP28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 IRAK3Q9Y616 596 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 PLXNA3P51805 1871 aa28.95■■■□□ 2.22
SMARCD3-201ENST00000262188 COL4A4P53420 1690 aaPredicted RBP28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 ARHGAP25P42331 645 aa28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 ADIGQ0VDE8 80 aa28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 CCAR2Q8N163 923 aaKnown RBP28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 SCAMP5Q8TAC9 235 aa28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 SPPL2BQ8TCT7 592 aa28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 NGRNQ9NPE2 291 aaKnown RBP28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 SSX2IPQ9Y2D8 614 aa28.94■■■□□ 2.22
SMARCD3-201ENST00000262188 GOLGA8SH3BPF8 625 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 LPXNO60711 386 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 HAPLN1P10915 354 aaPredicted RBP28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 ATF2P15336 505 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 SLC8A3P57103 927 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 GIPC2Q8TF65 315 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 ZNF576Q9H609 170 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 CNOT8Q9UFF9 292 aaKnown RBP28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 ANKRD62A6NC57 917 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 SOX1O00570 391 aaPredicted RBP28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 FAM183BPQ6ZVS7 135 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 C18orf8Q96DM3 657 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 NOX5Q96PH1 765 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 EMILIN2Q9BXX0 1053 aa28.93■■■□□ 2.22
SMARCD3-201ENST00000262188 SLU7O95391 586 aaKnown RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 ATF6P18850 670 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 MTMR3Q13615 1198 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 SRLQ86TD4 932 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 XYLT1Q86Y38 959 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 GPR65Q8IYL9 337 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 CTNNBL1Q8WYA6 563 aaPredicted RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 C16orf45Q96MC5 204 aaPredicted RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 ABCB6Q9NP58 842 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 OSGEPQ9NPF4 335 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 KCND1Q9NSA2 647 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 PAPSS1O43252 624 aaPredicted RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 ADH1AP07327 375 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 C1QBPQ07021 282 aaKnown RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 TAF5Q15542 800 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 LRIT3Q3SXY7 679 aa28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 SUGP1Q8IWZ8 645 aaKnown RBP28.92■■■□□ 2.22
SMARCD3-201ENST00000262188 TMEM253P0C7T8 217 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 TKTL1P51854 596 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 CREMQ03060 361 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 C10orf76Q5T2E6 689 aa28.91■■■□□ 2.22
SMARCD3-201ENST00000262188 TPGS2Q68CL5 300 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms