RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 LMNTD2Q8IXW0 634 aa20.21■□□□□ 0.83
SCARB1-201ENST00000261693 SKA1Q96BD8 255 aa20.21■□□□□ 0.83
SCARB1-201ENST00000261693 MECRQ9BV79 373 aa20.21■□□□□ 0.83
SCARB1-201ENST00000261693 RAB6CQ9H0N0 254 aa20.21■□□□□ 0.83
SCARB1-201ENST00000261693 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
SCARB1-201ENST00000261693 APOC4-APOC2K7ER74 178 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 TOM1L1O75674 476 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 APOC2P02655 101 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 CDHR3Q6ZTQ4 885 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 DPH6Q7L8W6 267 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
SCARB1-201ENST00000261693 CTAGE3PQ8IX95 158 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 LRRN4Q8WUT4 740 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 WDR60Q8WVS4 1066 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 PCNTO95613 3336 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 RLFQ13129 1914 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 MGAMO43451 1857 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 NVLO15381 856 aaKnown RBP20.2■□□□□ 0.82
SCARB1-201ENST00000261693 HNRNPCL1O60812 293 aaKnown RBP20.2■□□□□ 0.82
SCARB1-201ENST00000261693 DHRS4L1P0CG22 281 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 ESRRAP11474 423 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-201ENST00000261693 ERFP50548 548 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 CEP120Q8N960 986 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 NRG4Q8WWG1 115 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 SLC44A1Q8WWI5 657 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 PCYT2Q99447 389 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 XYLT2Q9H1B5 865 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 TAS2R1Q9NYW7 299 aa20.2■□□□□ 0.82
SCARB1-201ENST00000261693 MTO1Q9Y2Z2 717 aaKnown RBP20.2■□□□□ 0.82
SCARB1-201ENST00000261693 AP3M2P53677 418 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 XYLT1Q86Y38 959 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
SCARB1-201ENST00000261693 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
SCARB1-201ENST00000261693 PHACTR1Q9C0D0 580 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 STOML1Q9UBI4 398 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 USP18Q9UMW8 372 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 MAP3K6O95382 1288 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 LMNAP02545 664 aaKnown RBP20.19■□□□□ 0.82
SCARB1-201ENST00000261693 SERPINB4P48594 390 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 ROR1Q01973 937 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 STXBP2Q15833 593 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 TAZQ16635 292 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 FAXCQ5TGI0 409 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 SNX30Q5VWJ9 437 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 CCDC62Q6P9F0 684 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 C1orf228Q6PIY5 440 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 ZPBP2Q6X784 338 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 PPM1NQ8N819 430 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 ZNF280CQ8ND82 737 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 OXNAD1Q96HP4 312 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-201ENST00000261693 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 NMUR2Q9GZQ4 415 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 HMGXB4Q9UGU5 601 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 TEX264Q9Y6I9 313 aa20.19■□□□□ 0.82
SCARB1-201ENST00000261693 FCHO1O14526 889 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 CAPN9O14815 690 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 HOXC6P09630 235 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 GRIK3Q13003 919 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 MDH1BQ5I0G3 518 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SH2D5Q6ZV89 423 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 LRRC71Q8N4P6 559 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 RNF149Q8NC42 400 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 FAF2Q96CS3 445 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 PEBP4Q96S96 227 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SRPK1Q96SB4 655 aaKnown RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 ACO2Q99798 780 aaKnown RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 FRMD8P1Q9BZ68 369 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 IQCGQ9H095 443 aaKnown RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 ZNF395Q9H8N7 513 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 PHIPQ8WWQ0 1821 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 CCDC195A0A1B0GUA6 201 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 TRIM49D1C9J1S8 452 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 OGTO15294 1046 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 ACADSP16219 412 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 CHSY1Q86X52 802 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 ARMC2Q8NEN0 867 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 UCMAQ8WVF2 138 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 TWNKQ96RR1 684 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
SCARB1-201ENST00000261693 PDGFDQ9GZP0 370 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.18■□□□□ 0.823e-8■□□□□ 10.2
SCARB1-201ENST00000261693 RPL26L1Q9UNX3 145 aaKnown RBP20.18■□□□□ 0.82
SCARB1-201ENST00000261693 H7C0C1 242 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 COPEO14579 308 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 RNF8O76064 485 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 TRUB2O95900 331 aaKnown RBP20.17■□□□□ 0.82
SCARB1-201ENST00000261693 ATP5OP48047 213 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 CDH6P55285 790 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 SLC18A2Q05940 514 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 CMASQ8NFW8 434 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-201ENST00000261693 SLC13A1Q9BZW2 595 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 RAB6BQ9NRW1 208 aa20.17■□□□□ 0.82
SCARB1-201ENST00000261693 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.17■□□□□ 0.828e-7■■□□□ 12.1
SCARB1-201ENST00000261693 CPSF3Q9UKF6 684 aaKnown RBP20.17■□□□□ 0.82
SCARB1-201ENST00000261693 CXorf49A8MYA2 514 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms