RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GIPC2Q8TF65 315 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 PPP2R3CQ969Q6 453 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 SPATA17Q96L03 361 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 C11orf70Q9BRQ4 267 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 PACSIN1Q9BY11 444 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 REV3LO60673 3130 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 PATJQ8NI35 1801 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 POU3F3P20264 500 aaPredicted RBP16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 ALDH1A3P47895 512 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 TKTL1P51854 596 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 MCOLN2Q8IZK6 566 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 PLEKHA4Q9H4M7 779 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 IGFLR1Q9H665 355 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 LRRC4Q9HBW1 653 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 ADAM22Q9P0K1 906 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 MTCL1Q9Y4B5 1905 aaKnown RBP16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 LCP1P13796 627 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 GABRB2P47870 512 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 USP46P62068 366 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 ADIGQ0VDE8 80 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 MTMR3Q13615 1198 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 SPA17Q15506 151 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 CYP4A22Q5TCH4 519 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 DENND5BQ6ZUT9 1274 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 Q7L0L9 218 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 IPO4Q8TEX9 1081 aaKnown RBP16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 SYNCQ9H7C4 482 aa16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 PAPSS1O43252 624 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 RFPL2O75678 378 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 ZMYND10O75800 440 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 ABCB4P21439 1286 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 IGFBP4P22692 258 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 ACADSBP45954 432 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 GALCP54803 685 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 PPP1R2P3Q6NXS1 205 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 PHLDB2Q86SQ0 1253 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 SCUBE3Q8IX30 993 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 NUP93Q8N1F7 819 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 HDAC7Q8WUI4 952 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 C18orf8Q96DM3 657 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 CEP295NLQ96MC4 621 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 MIS12Q9H081 205 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 THAP2Q9H0W7 228 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 PCDHA13Q9Y5I0 950 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 ADGRG1Q9Y653 693 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 USP3Q9Y6I4 520 aa16.64■□□□□ 0.25
CCDC90B-201ENST00000260054 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 IPO7O95373 1038 aaKnown RBP16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 GLP2RO95838 553 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 LRG1P02750 347 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 CALB1P05937 261 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 RRM1P23921 792 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 MAGEA1P43355 309 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 PPM1LQ5SGD2 360 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 XYLT1Q86Y38 959 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 SIX6OS1Q8N1H7 587 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 MSANTD4Q8NCY6 345 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 NDRG1Q92597 394 aaKnown RBP16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 ULBP1Q9BZM6 244 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 IL37Q9NZH6 218 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 CHORDC1Q9UHD1 332 aaPredicted RBP16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 TFR2Q9UP52 801 aa16.63■□□□□ 0.25
CCDC90B-201ENST00000260054 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 RCCD1A6NED2 376 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 LINC01565O15544 149 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 EPHB3P54753 998 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 PLD1Q13393 1074 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 VEPH1Q14D04 833 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 FAM183BPQ6ZVS7 135 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 EFHBQ8N7U6 833 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 PSMG2Q969U7 264 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF653Q96CK0 615 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 GAS2L1Q99501 681 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 CNGB3Q9NQW8 809 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 PYCARDQ9ULZ3 195 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 NCANO14594 1321 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 TCRBV5S1A1TA0A578 114 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 FAM92AA1XBS5 289 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 CCL16O15467 120 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms