RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 FBXL5Q9UKA1 691 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TDRKHQ9Y2W6 561 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NCAM2O15394 837 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PSMD3O43242 534 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CYP3A4P08684 503 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 RPL17P18621 184 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PBX3P40426 434 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 THOP1P52888 689 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 DUSP4Q13115 394 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CUL1Q13616 776 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ZKSCAN8Q15776 578 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PHKG1Q16816 387 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ZBTB41Q5SVQ8 909 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 HECTD3Q5T447 861 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 IRAK1BP1Q5VVH5 260 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ALS2CLQ60I27 953 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TTC17Q96AE7 1141 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 RAB6BQ9NRW1 208 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 C20orf96Q9NUD7 363 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SUPT3HB4E1H0 165 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ZW10O43264 779 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SUPT3HO75486 399 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 GFAPP14136 432 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TUBP50607 506 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 GALCP54803 685 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SPDYAQ5MJ70 313 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TSHZ1Q6ZSZ6 1077 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SLC47A2Q86VL8 602 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 SPATA24Q86W54 205 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TMCO5AQ8N6Q1 288 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 BBS2Q9BXC9 721 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ADAM33Q9BZ11 813 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 AGPAT5Q9NUQ2 364 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ZNF212Q9UDV6 495 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 VANGL2Q9ULK5 521 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CLDN5O00501 218 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PER2O15055 1255 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 IL1BP01584 269 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 RARGP13631 454 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 KLHDC7AQ5VTJ3 777 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CCDC137Q6PK04 289 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TBC1D1Q86TI0 1168 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 TMEM86AQ8N2M4 240 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 FMO2Q99518 471 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ABCG4Q9H172 646 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 EVA1BQ9NVM1 165 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 INTS13Q9NVM9 706 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 NDUFAB1O14561 156 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 PARNO95453 639 aaKnown RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CLCN1P35523 988 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 C6orf118Q5T5N4 469 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 B4GALNT4Q76KP1 1039 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 MAML1Q92585 1016 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 NCLNQ969V3 563 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 CCDC3Q9BQI4 270 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 ASB7Q9H672 318 aa6.61□□□□□ -1.35
BRIP1-201ENST00000259008 LRRIQ3A6PVS8 624 aaPredicted RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 PDZK1P1A8MUH7 402 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 COPEO14579 308 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 PSMD10O75832 226 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 NRIP1P48552 1158 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 RABGGTBP53611 331 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 IL9RQ01113 521 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 FBXO46Q6PJ61 603 aaPredicted RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 PRSS55Q6UWB4 352 aaPredicted RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 MARK2Q7KZI7 788 aaKnown RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 SRRM1Q8IYB3 904 aaKnown RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 RAB3IPQ96QF0 476 aaPredicted RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 ACO2Q99798 780 aaKnown RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 TXNRD2Q9NNW7 524 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 MARCH2Q9P0N8 246 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 XPO7Q9UIA9 1087 aaKnown RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 STK38LQ9Y2H1 464 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 ADGRA2Q96PE1 1338 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 RGPD5Q99666 1765 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 HEATR9A2RTY3 570 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 P4HA2O15460 535 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 CSH1P0DML2 217 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 CSH2P0DML3 217 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 FOSL2P15408 326 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 PON1P27169 355 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 WASHC5Q12768 1159 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 TTC31Q49AM3 519 aaPredicted RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 IZUMO3Q5VZ72 239 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 RAP1GAP2Q684P5 730 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 OLFML2BQ68BL8 750 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 TRMT11Q7Z4G4 463 aaKnown RBP6.6□□□□□ -1.35
BRIP1-201ENST00000259008 ZNF677Q86XU0 584 aa6.6□□□□□ -1.35
BRIP1-201ENST00000259008 FAM71DQ8N9W8 422 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms