RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 CD300LGQ6UXG3 332 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 RASGEF1CQ8N431 466 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 C3orf20Q8ND61 904 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 SPATA4Q8NEY3 305 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 FEZF2Q8TBJ5 459 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 PABPC5Q96DU9 382 aaKnown RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 CDCA3Q99618 268 aaPredicted RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 ZBP1Q9H171 429 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 MARCH5Q9NX47 278 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 STRIP2Q9ULQ0 834 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 TMEM191CA6NGB0 347 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 HIDE1A8MVS5 230 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 PER2O15055 1255 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 SPOPO43791 374 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 CEP104O60308 925 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 PROSCO94903 275 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 SOD2P04179 222 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 CTNNA1P35221 906 aaKnown RBP18.39■□□□□ 0.53
SRSF1-201ENST00000258962 GABRB2P47870 512 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 PEX5P50542 639 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 RPL7AP62424 266 aaKnown RBP18.39■□□□□ 0.53
SRSF1-201ENST00000258962 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
SRSF1-201ENST00000258962 ZNF252P-AS1Q0IIN9 211 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 DCLRE1AQ6PJP8 1040 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 XYLT1Q86Y38 959 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 ACTRT1Q8TDG2 376 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 CARD9Q9H257 536 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 MRPL17Q9NRX2 175 aaKnown RBP18.39■□□□□ 0.53
SRSF1-201ENST00000258962 SSX2IPQ9Y2D8 614 aa18.39■□□□□ 0.53
SRSF1-201ENST00000258962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.38■□□□□ 0.53
SRSF1-201ENST00000258962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.38■□□□□ 0.53
SRSF1-201ENST00000258962 C2orf71A6NGG8 1288 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 F8W810 466 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 MYO1FO00160 1098 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 TULP2O00295 520 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 B3GAT3O94766 335 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 URODP06132 367 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 CCDC130P13994 396 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 KCNA5P22460 613 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 OGDHQ02218 1023 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 FUT10Q6P4F1 479 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 EFHBQ8N7U6 833 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 AUTS2Q8WXX7 1259 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 C18orf8Q96DM3 657 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 MCEEQ96PE7 176 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 VN1R3Q9BXE9 311 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 ANKZF1Q9H8Y5 726 aa18.38■□□□□ 0.53
SRSF1-201ENST00000258962 SF3B1O75533 1304 aaKnown RBP eCLIP18.38■□□□□ 0.533e-9■■■□□ 19.1
SRSF1-201ENST00000258962 RNASE9P60153 205 aaKnown RBP18.37■□□□□ 0.53
SRSF1-201ENST00000258962 PSMC1P62191 440 aaKnown RBP18.37■□□□□ 0.53
SRSF1-201ENST00000258962 TFF2Q03403 129 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 ELAVL2Q12926 359 aaKnown RBP18.37■□□□□ 0.53
SRSF1-201ENST00000258962 ADAM15Q13444 863 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 DUSP6Q16828 381 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 CCDC142Q17RM4 750 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 USP41Q3LFD5 358 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 KIAA0319Q5VV43 1072 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 DSTYKQ6XUX3 929 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 GPR161Q8N6U8 529 aaKnown RBP18.37■□□□□ 0.53
SRSF1-201ENST00000258962 HASPINQ8TF76 798 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 HERC2P3Q9BVR0 1158 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
SRSF1-201ENST00000258962 PCDHA3Q9Y5H8 950 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 IRAK3Q9Y616 596 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 BRWD1Q9NSI6 2320 aa18.37■□□□□ 0.53
SRSF1-201ENST00000258962 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 GOLGA8SH3BPF8 625 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 C2CD2LO14523 706 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TRAPPC3O43617 180 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 ATP2C2O75185 946 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TUBBP07437 444 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SETSIPP0DME0 302 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SRGAP2BP0DMP2 458 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 ACAT1P24752 427 aaKnown RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TKTP29401 623 aaKnown RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 MAN1A1P33908 653 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SLC1A1P43005 524 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 GLUD2P49448 558 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 NDUFV1P49821 464 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 ZNF268Q14587 947 aaPredicted RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 DAB2IPQ5VWQ8 1189 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TAS1R1Q7RTX1 841 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TMEM86AQ8N2M4 240 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 MMGT1Q8N4V1 131 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 UBL4BQ8N7F7 174 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 B3GALNT2Q8NCR0 500 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 MSANTD4Q8NCY6 345 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 JOSD2Q8TAC2 188 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SLC35F5Q8WV83 523 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 MCRS1Q96EZ8 462 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TNIP3Q96KP6 325 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms