RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 SNX17Q15036 470 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 TMED2Q15363 201 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 LRRC38Q5VT99 294 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 SPATA18Q8TC71 538 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 ZNF638Q14966 1978 aaKnown RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 SCN4AP35499 1836 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 SYNJ2BP-COX16A0A087WUM0 186 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 SMIM28A0A1B0GU29 152 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 C2CD4BA6NLJ0 364 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 CLDN5O00501 218 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 AVILO75366 819 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 F2P00734 622 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 HMGCRP04035 888 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 P4HA1P13674 534 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 CTGFP29279 349 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 ATICP31939 592 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 VSTM1Q6UX27 236 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 SGSM3Q96HU1 749 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 HOMER3Q9NSC5 361 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 COX16Q9P0S2 106 aa13.74□□□□□ -0.21
THSD1-201ENST00000258613 TPX2Q9ULW0 747 aaKnown RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 TIMM13Q9Y5L4 95 aaPredicted RBP13.74□□□□□ -0.21
THSD1-201ENST00000258613 AGTP01019 485 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 RBP3P10745 1247 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 SPDYCQ5MJ68 293 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 C12orf65Q9H3J6 166 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 CXorf56Q9H5V9 222 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 MFHAS1Q9Y4C4 1052 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 COL1A2P08123 1366 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 GPD1P21695 349 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 GCAP28676 217 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 ZNF143P52747 638 aaPredicted RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 EIF3EP60228 445 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 PITX1P78337 314 aaPredicted RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 BASP1P80723 227 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 TAP1Q03518 808 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 ZKSCAN8Q15776 578 aaPredicted RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 SYDE1Q6ZW31 735 aaPredicted RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 RSAD2Q8WXG1 361 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 CPT1BQ92523 772 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 WNT8BQ93098 351 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 THOC1Q96FV9 657 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 WDR83Q9BRX9 315 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 VRTNQ9H8Y1 702 aa13.73□□□□□ -0.21
THSD1-201ENST00000258613 DDX56Q9NY93 547 aaKnown RBP13.73□□□□□ -0.21
THSD1-201ENST00000258613 TTC3P53804 2025 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 TMEM63AO94886 807 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 PGK1P00558 417 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 KRT7P08729 469 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 HOXD8P13378 290 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 DRD4P21917 467 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 ZBTB6Q15916 424 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 LPPQ93052 612 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 FAM129AQ9BZQ8 928 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 ARHGAP39Q9C0H5 1083 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 ZSWIM8A7E2V4 1837 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 RARBP10826 455 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 BRAFP15056 766 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 IL4RP24394 825 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 GABRB2P47870 512 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 PSEN2P49810 448 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 TNFAIP8L3Q5GJ75 292 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 MORN1Q5T089 497 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 PACS2Q86VP3 889 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 C4orf33Q8N1A6 199 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 PYROXD2Q8N2H3 581 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 SLC2A14Q8TDB8 520 aa13.72□□□□□ -0.21
THSD1-201ENST00000258613 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 PRCCQ92733 491 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 ZNF317Q96PQ6 595 aaPredicted RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 ELAC2Q9BQ52 826 aaKnown RBP13.72□□□□□ -0.21
THSD1-201ENST00000258613 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms