RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TYK2P29597 1187 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 VHLP40337 213 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ARL4AP40617 200 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 AP1B1Q10567 949 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 KCTD2Q14681 263 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RBBP5Q15291 538 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 LY6KQ17RY6 165 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 NBPF20Q3BBV1 942 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 CCDC14Q49A88 953 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 PTPN20Q4JDL3 420 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RABGAP1LQ5R372 815 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RHBDF2Q6PJF5 856 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP44-201ENST00000258499 CLNKQ7Z7G1 428 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ALYREFQ86V81 257 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 ZNF354CQ86Y25 554 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 MAGEC3Q8TD91 643 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 TFAP2BQ92481 460 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 KIF12Q96FN5 646 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ZNF570Q96NI8 536 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 PORCNQ9H237 461 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ARL8BQ9NVJ2 186 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ARHGAP28Q9P2N2 729 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SPATA31A6Q5VVP1 1343 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 MYH11P35749 1972 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 MYH1P12882 1939 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 MYH4Q9Y623 1939 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 TCRBV7S3A2A0A539 114 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 TCRBV9S1A1TA0A576 114 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ADCY3O60266 1144 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 GRIN3BO60391 1043 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ABHD2P08910 425 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 GPD1P21695 349 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RFC5P40937 340 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 CDKN2BP42772 138 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 GMPSP49915 693 aaPredicted RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 AP3M2P53677 418 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 FKBP1AP62942 108 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 CRADDP78560 199 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 OGDHQ02218 1023 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 PTPN11Q06124 597 aaPredicted RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 TMEM62Q0P6H9 643 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 IFRD2Q12894 506 aaPredicted RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 CAPSQ13938 189 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 DPYSL3Q14195 570 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SLC45A4Q5BKX6 768 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RNASEH2BQ5TBB1 312 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 C16orf46Q6P387 395 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RFWD3Q6PCD5 774 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ANKS1BQ7Z6G8 1248 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 BRSK2Q8IWQ3 736 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 TEKT4Q8WW24 435 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 CPT1BQ92523 772 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 BTBD10Q9BSF8 475 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 LRMDAQ9H2I8 198 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 PAK5Q9P286 719 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 LGALS13Q9UHV8 139 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ZNF541Q9H0D2 1346 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 A0A0B4J269 797 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 NEMP1O14524 444 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 B4GALT5O43286 388 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 LRCH4O75427 683 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 LSM8O95777 96 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 EGFRP00533 1210 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ASS1P00966 412 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 RBL1P28749 1068 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 STIP1P31948 543 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 RPL10AP62906 217 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 MRPS35P82673 323 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 MGAT5Q09328 741 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 LAMTOR4Q0VGL1 99 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 Q3C1V9 767 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 MSS51Q4VC12 460 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 KHDC1Q4VXA5 237 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 GLRA4Q5JXX5 417 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 TTC39BQ5VTQ0 682 aaPredicted RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 EFCAB12Q6NXP0 572 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 XRRA1Q6P2D8 792 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 DSTYKQ6XUX3 929 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SLC26A11Q86WA9 606 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 RASSF3Q86WH2 238 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 WDR49Q8IV35 697 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SPDYE1Q8NFV5 336 aaPredicted RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP44-201ENST00000258499 SCG3Q8WXD2 468 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 SLCO2A1Q92959 643 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 HPDLQ96IR7 371 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 CPXM1Q96SM3 734 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 DDX50Q9BQ39 737 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 STRA6Q9BX79 667 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 ZNF408Q9H9D4 720 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 PPCSQ9HAB8 311 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 WDR35Q9P2L0 1181 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SYNPO2Q9UMS6 1093 aa4.94□□□□□ -1.62
USP44-201ENST00000258499 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.94□□□□□ -1.62
USP44-201ENST00000258499 NAV1Q8NEY1 1877 aa4.93□□□□□ -1.62
USP44-201ENST00000258499 KAT6AQ92794 2004 aa4.93□□□□□ -1.62
USP44-201ENST00000258499 CYB561D2O14569 222 aa4.93□□□□□ -1.62
USP44-201ENST00000258499 TM9SF1O15321 606 aa4.93□□□□□ -1.62
USP44-201ENST00000258499 ATP9BO43861 1147 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms