RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 DHX33Q9H6R0 707 aaKnown RBP17.72■□□□□ 0.43
CDK4-201ENST00000257904 RPAP3Q9H6T3 665 aaPredicted RBP17.72■□□□□ 0.43
CDK4-201ENST00000257904 C2orf71A6NGG8 1288 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 FCHO1O14526 889 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 AHCYL1O43865 530 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.43
CDK4-201ENST00000257904 INHBAP08476 426 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 CD48P09326 243 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 RARBP10826 455 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 MYL2P10916 166 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 KRT3P12035 628 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 SKIP12755 728 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 SP100P23497 879 aaPredicted RBP17.71■□□□□ 0.43
CDK4-201ENST00000257904 MTMR2Q13614 643 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 DPYSL3Q14195 570 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 TTC7BQ86TV6 843 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
CDK4-201ENST00000257904 STMN2Q93045 179 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 ATG4CQ96DT6 458 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 CDHR1Q96JP9 859 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 MTMR12Q9C0I1 747 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK4-201ENST00000257904 STX18Q9P2W9 335 aaKnown RBP17.71■□□□□ 0.43
CDK4-201ENST00000257904 KBTBD13C9JR72 458 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 KLF11O14901 512 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 APOC2P02655 101 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 SERPINB4P48594 390 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 EIF3EP60228 445 aaKnown RBP17.71■□□□□ 0.43
CDK4-201ENST00000257904 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 FNIP1Q8TF40 1166 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 UCMAQ8WVF2 138 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 ASB3Q9Y575 518 aa17.71■□□□□ 0.43
CDK4-201ENST00000257904 MCF2LO15068 1137 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 ATG7O95352 703 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 OATP04181 439 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 POLR2BP30876 1174 aaKnown RBP17.7■□□□□ 0.42
CDK4-201ENST00000257904 TNFSF9P41273 254 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 RCN2Q14257 317 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 TSC22D3Q99576 134 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 NMUR2Q9GZQ4 415 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 VCXQ9H320 206 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 TMEM134Q9H6X4 195 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 ARHGEF4Q9NR80 690 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 METTL5Q9NRN9 209 aaKnown RBP17.7■□□□□ 0.42
CDK4-201ENST00000257904 DLGAP2Q9P1A6 1054 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 TJP2Q9UDY2 1190 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 TEX264Q9Y6I9 313 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 FAM237BA0A1B0GVD1 139 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 A8MXQ7 604 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 WEE2P0C1S8 567 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 RBP3P10745 1247 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 NRLP54845 237 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 AP1B1Q10567 949 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 GRM1Q13255 1194 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 ZRSR2Q15696 482 aaKnown RBP17.7■□□□□ 0.42
CDK4-201ENST00000257904 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
CDK4-201ENST00000257904 KCTD6Q8NC69 237 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 DTX3LQ8TDB6 740 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 SLC7A3Q8WY07 619 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 ARMCX1Q9P291 453 aa17.7■□□□□ 0.42
CDK4-201ENST00000257904 SPATA31C2B4DYI2 1134 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 E5RJQ4 531 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 MAP3K13O43283 966 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 FAM189A1O60320 539 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 SMIM24O75264 130 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 SPAG6O75602 509 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 ITGBL1O95965 494 aaPredicted RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 RFC5P40937 340 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 YWHAGP61981 247 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDK4-201ENST00000257904 THEMIS2Q5TEJ8 643 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 DCAF15Q66K64 600 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 GPC2Q8N158 579 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 ARHGAP24Q8N264 748 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 PDCD7Q8N8D1 485 aaKnown RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 SH3GL3Q99963 347 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 LBHD1Q9BQE6 289 aaPredicted RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 ZNF302Q9NR11 478 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 ZNF212Q9UDV6 495 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 CYTH4Q9UIA0 394 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
CDK4-201ENST00000257904 MAFBQ9Y5Q3 323 aaPredicted RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 DICER1Q9UPY3 1922 aaKnown RBP17.69■□□□□ 0.42
CDK4-201ENST00000257904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.68■□□□□ 0.42
CDK4-201ENST00000257904 TTLL13PA6NNM8 815 aa17.68■□□□□ 0.42
CDK4-201ENST00000257904 COPEO14579 308 aa17.68■□□□□ 0.42
CDK4-201ENST00000257904 PGM1P36871 562 aa17.68■□□□□ 0.42
CDK4-201ENST00000257904 RAP1GDS1P52306 607 aa17.68■□□□□ 0.42
CDK4-201ENST00000257904 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
CDK4-201ENST00000257904 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
CDK4-201ENST00000257904 THOC5Q13769 683 aaKnown RBP17.68■□□□□ 0.42
CDK4-201ENST00000257904 OR52E8Q6IFG1 317 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms