RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 RFX1P22670 979 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 ROR1Q01973 937 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 DUSP4Q13115 394 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 DDR2Q16832 855 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
NIP7-201ENST00000254940 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 KLHL7Q8IXQ5 586 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
NIP7-201ENST00000254940 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 KRT35Q92764 455 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.37
NIP7-201ENST00000254940 COL6A3P12111 3177 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 SEC24AO95486 1093 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CYP11A1P05108 521 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CCDC172P0C7W6 258 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 LHX1P48742 406 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 ZNF132P52740 706 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CDR2Q01850 454 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 DSG1Q02413 1049 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 MESDQ14696 234 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 BEND6Q5SZJ8 279 aaPredicted RBP12.76□□□□□ -0.37
NIP7-201ENST00000254940 PAQR9Q6ZVX9 377 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 FUKQ8N0W3 1084 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 TMEM86AQ8N2M4 240 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 ALG3Q92685 438 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CDH22Q9UJ99 828 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 H3BNC9 293 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 SYN3O14994 580 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 LPXNO60711 386 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 MICAL2O94851 1124 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 OAZ2O95190 189 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 CTSAP10619 480 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 PRLRP16471 622 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 TYMPP19971 482 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 KLRC2P26717 231 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 TSPY1Q01534 308 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 PLCB3Q01970 1234 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
NIP7-201ENST00000254940 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
NIP7-201ENST00000254940 ENOSF1Q7L5Y1 443 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 C1orf131Q8NDD1 294 aaKnown RBP12.76□□□□□ -0.37
NIP7-201ENST00000254940 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 KRT12Q99456 494 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 ARGLU1Q9NWB6 273 aaPredicted RBP12.76□□□□□ -0.37
NIP7-201ENST00000254940 ALG6Q9Y672 507 aa12.76□□□□□ -0.37
NIP7-201ENST00000254940 NRIP1P48552 1158 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
NIP7-201ENST00000254940 SMAD3P84022 425 aaKnown RBP12.75□□□□□ -0.37
NIP7-201ENST00000254940 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
NIP7-201ENST00000254940 CCDC85BQ15834 202 aaPredicted RBP12.75□□□□□ -0.37
NIP7-201ENST00000254940 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 TXLNBQ8N3L3 684 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 WDTC1Q8N5D0 677 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 FUT8Q9BYC5 575 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 DSEQ9UL01 958 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
NIP7-201ENST00000254940 RTN2O75298 545 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 AP1G2O75843 785 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 GLI1P08151 1106 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 EPCAMP16422 314 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 RRM1P23921 792 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 PCSK1P29120 753 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 GPC5P78333 572 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
NIP7-201ENST00000254940 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 CFAP221Q4G0U5 840 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 CYP4A22Q5TCH4 519 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
NIP7-201ENST00000254940 FAM35AQ86V20 835 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
NIP7-201ENST00000254940 C12orf76Q8N812 135 aaPredicted RBP12.74□□□□□ -0.37
NIP7-201ENST00000254940 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 ZNF653Q96CK0 615 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 ACBD6Q9BR61 282 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 NUP85Q9BW27 656 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 CYP4F11Q9HBI6 524 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 LINC01565O15544 149 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 TCF4P15884 667 aa12.74□□□□□ -0.37
NIP7-201ENST00000254940 GRIK1P39086 918 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms