RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CCNG2Q16589 344 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 AASDHQ4L235 1098 aaPredicted RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 NT5DC1Q5TFE4 455 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ZNF571Q7Z3V5 609 aaPredicted RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 DCDC2Q9UHG0 476 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 SERPIND1P05546 499 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ENO3P13929 434 aaPredicted RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 OXCT1P55809 520 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 GCNT1Q02742 428 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 TRPM8Q7Z2W7 1104 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 CASKIN2Q8WXE0 1202 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 PRPF18Q99633 342 aaKnown RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 DOLKQ9UPQ8 538 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ASS1P00966 412 aaKnown RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 OTUD4Q01804 1114 aaKnown RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 SLC30A10Q6XR72 485 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 DENND5BQ6ZUT9 1274 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 ERP27Q96DN0 273 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 TMA16Q96EY4 203 aaKnown RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 FAR2Q96K12 515 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 OSMRQ99650 979 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 DPP7Q9UHL4 492 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 PLSCR1O15162 318 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 CXCL8P10145 99 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 RARGP13631 454 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 ARL4DP49703 201 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 ORC1Q13415 861 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 HIST2H2ACQ16777 129 aaPredicted RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 HIST2H2AA3Q6FI13 130 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 SLC27A1Q6PCB7 646 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 VCPIP1Q96JH7 1222 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 PNMA5Q96PV4 448 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 KLF6Q99612 283 aaPredicted RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 UBXN6Q9BZV1 441 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 FAM86B1E9PN63 330 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 FAM86B2P0C5J1 330 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 PSMC6P62333 389 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 POU4F1Q01851 419 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 UNC45BQ8IWX7 931 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 KIAA0895Q8NCT3 520 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 TBCBQ99426 244 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 EMILIN2Q9BXX0 1053 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 TFR2Q9UP52 801 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 CAPN6Q9Y6Q1 641 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 GAKO14976 1311 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 CNTFP26441 200 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 KCNK10P57789 538 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 CHI3L2Q15782 390 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 TNIP2Q8NFZ5 429 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 FAM167BQ9BTA0 163 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
PTPRE-201ENST00000254667 SELENONQ9NZV5 590 aa19.65■□□□□ 0.74
PTPRE-201ENST00000254667 LY6KQ17RY6 165 aa19.64■□□□□ 0.74
PTPRE-201ENST00000254667 MIB1Q86YT6 1006 aa19.64■□□□□ 0.74
PTPRE-201ENST00000254667 INTS13Q9NVM9 706 aa19.64■□□□□ 0.74
PTPRE-201ENST00000254667 ACKR2O00590 384 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 HNRNPRO43390 633 aaKnown RBP19.64■□□□□ 0.73
PTPRE-201ENST00000254667 DDNO94850 711 aaPredicted RBP19.64■□□□□ 0.73
PTPRE-201ENST00000254667 AKR1A1P14550 325 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 SERPINB8P50452 374 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 SLC47A2Q86VL8 602 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 ITM2BQ9Y287 266 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 HSPA1AP0DMV8 641 aaKnown RBP19.64■□□□□ 0.73
PTPRE-201ENST00000254667 HSPA1BP0DMV9 641 aaKnown RBP19.64■□□□□ 0.73
PTPRE-201ENST00000254667 LONP2Q86WA8 852 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 VGLL2Q8N8G2 317 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 SETD4Q9NVD3 440 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF286BP0CG31 522 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 KBTBD12Q3ZCT8 623 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF467Q7Z7K2 595 aaPredicted RBP19.64■□□□□ 0.73
PTPRE-201ENST00000254667 HS6ST3Q8IZP7 471 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 RXFP2Q8WXD0 754 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 MKL1Q969V6 931 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 APOL5Q9BWW9 433 aa19.64■□□□□ 0.73
PTPRE-201ENST00000254667 MROH2AA6NES4 1674 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 GOLGA8TH3BQL2 631 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 FAM107AO95990 144 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 PPP3CCP48454 512 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 SARSP49591 514 aaKnown RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 EPHB3P54753 998 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ILF2Q12905 390 aaKnown RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 MKRN4PQ13434 485 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 HERC6Q8IVU3 1022 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 C3orf20Q8ND61 904 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF555Q8NEP9 628 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 BLOC1S5Q8TDH9 187 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 PACSIN1Q9BY11 444 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ARHGAP20Q9P2F6 1191 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 SLC25A13Q9UJS0 675 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 RAP1GAPP47736 663 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 E2F4Q16254 413 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 MDH1BQ5I0G3 518 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 BTNL9Q6UXG8 535 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 FUCA2Q9BTY2 467 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 VPS26AO75436 327 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 TOMM70O94826 608 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 MAP3K7CLP57077 242 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF268Q14587 947 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms