RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 GCNT4Q9P109 453 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 KMT2EQ8IZD2 1858 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 FAM92AA1XBS5 289 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 BEST1O76090 585 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 PRAMEF12O95522 483 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 SLC8A3P57103 927 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 IFRD2Q12894 506 aaPredicted RBP25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 SGO2Q562F6 1265 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 USP13Q92995 863 aaPredicted RBP25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 PRRX2Q99811 253 aa25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 HELZP42694 1942 aaKnown RBP25.75■■□□□ 1.71
SDF2L1-201ENST00000248958 STK25O00506 426 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 CKMP06732 381 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 PAEPP09466 180 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 VDRP11473 427 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 HDCP19113 662 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 AVPR2P30518 371 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 MLLT6P55198 1093 aaPredicted RBP25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 STX1AQ16623 288 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 SMYD5Q6GMV2 418 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 GBP6Q6ZN66 633 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 ENOSF1Q7L5Y1 443 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 CSGALNACT1Q8TDX6 532 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 UBXN6Q9BZV1 441 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 TBC1D17Q9HA65 648 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 ARIH1Q9Y4X5 557 aaPredicted RBP25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 PCDHB4Q9Y5E5 795 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 TICRRQ7Z2Z1 1910 aa25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 KIF26AQ9ULI4 1882 aaPredicted RBP25.74■■□□□ 1.71
SDF2L1-201ENST00000248958 GLULP15104 373 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 TCF3P15923 654 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 AOC1P19801 751 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 PTMSP20962 102 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 EEF1GP26641 437 aaKnown RBP25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 SNX30Q5VWJ9 437 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 CWF19L1Q69YN2 538 aaKnown RBP25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 TMEM270Q6UE05 265 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 GPIHBP1Q8IV16 184 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 ARL14EPQ8N8R7 260 aaPredicted RBP25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 ANKRD52Q8NB46 1076 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 SCAMP5Q8TAC9 235 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 FAM122AQ96E09 287 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 MSANTD3Q96H12 275 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 TUBGCP2Q9BSJ2 902 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 SMG9Q9H0W8 520 aaKnown RBP25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 NFE2L3Q9Y4A8 694 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 COL4A2P08572 1712 aa25.73■■□□□ 1.71
SDF2L1-201ENST00000248958 C2orf78A6NCI8 922 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 HHLA1C9JL84 531 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 ABL1P00519 1130 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 ACO1P21399 889 aaKnown RBP25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 EXOC3L4Q17RC7 722 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 C1orf228Q6PIY5 440 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 TRIM65Q6PJ69 517 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 RRAGAQ7L523 313 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 ARHGEF19Q8IW93 802 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 LRRC3BQ96PB8 259 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 NELL2Q99435 816 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 DDX23Q9BUQ8 820 aaKnown RBP25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 HESX1Q9UBX0 185 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 ARHGAP26Q9UNA1 814 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 MYO16Q9Y6X6 1858 aa25.72■■□□□ 1.71
SDF2L1-201ENST00000248958 KCNJ18B7U540 433 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 ARNTLO00327 626 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 MAN2B1O00754 1011 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 OLFM2O95897 454 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 OAS1P00973 400 aaKnown RBP25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 ZDHHC11BP0C7U3 371 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 CD19P15391 556 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 TUBP50607 506 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 KCNJ12Q14500 433 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 STILQ15468 1287 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 VWA3BQ502W6 1294 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 CC2D1AQ6P1N0 951 aaPredicted RBP25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 CYP2S1Q96SQ9 504 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 NDST4Q9H3R1 872 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 UBE2TQ9NPD8 197 aaPredicted RBP25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 TLR8Q9NR97 1041 aaKnown RBP25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 HEBP1Q9NRV9 189 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 TMEM63CQ9P1W3 806 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 CCL26Q9Y258 94 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 MRPS17Q9Y2R5 130 aaKnown RBP25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 TRIOO75962 3097 aa25.71■■□□□ 1.71
SDF2L1-201ENST00000248958 KANSL1LA0AUZ9 987 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 BCAT1P54687 386 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 VCPP55072 806 aaKnown RBP25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 MFAP3P55082 362 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 SLC7A9P82251 487 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 TCP11X2Q5H9J9 407 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 TPRG1Q6ZUI0 275 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 KIAA1958Q8N8K9 716 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 KAT5Q92993 513 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 SLC22A12Q96S37 553 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 CRACR2AQ9BSW2 395 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 OSBPL6Q9BZF3 934 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 C8orf33Q9H7E9 229 aaPredicted RBP25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 SAMSN1Q9NSI8 373 aaKnown RBP25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 CHORDC1Q9UHD1 332 aaPredicted RBP25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 TSPAN16Q9UKR8 245 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 CNTN6Q9UQ52 1028 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms