RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 RIOX2Q8IUF8 465 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 DNAJC19Q96DA6 116 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 HDAC11Q96DB2 347 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 SNF8Q96H20 258 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 TRIM56Q9BRZ2 755 aaKnown RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 TMEM117Q9H0C3 514 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 PREBQ9HCU5 417 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 TTC7AQ9ULT0 858 aaPredicted RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 UBQLN1Q9UMX0 589 aaKnown RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 SH3GLB1Q9Y371 365 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 PSMG1O95456 288 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 TAS1R2Q8TE23 839 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 SLITRK1Q96PX8 696 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 CGRRF1Q99675 332 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 FSD1LQ9BXM9 530 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 SP110Q9HB58 689 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 FKTNO75072 461 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 LRG1P02750 347 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 GZMAP12544 262 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 GPS1Q13098 491 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 DCTN2Q13561 401 aaKnown RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 GLRA4Q5JXX5 417 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 ETNPPLQ8TBG4 499 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 MAML1Q92585 1016 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 THAP2Q9H0W7 228 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 TRABDQ9H4I3 376 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 SETD4Q9NVD3 440 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 PPARGC1AQ9UBK2 798 aaKnown RBP11.42□□□□□ -0.58
COPA-201ENST00000241704 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
COPA-201ENST00000241704 IQANK1A0A1B0GTG1 560 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 KLRG2A4D1S0 409 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 ALADP13716 330 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 TAF6P49848 677 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SOX10P56693 466 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 MTA1Q13330 715 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 LRRC36Q1X8D7 754 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 P3H1Q32P28 736 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SYDE1Q6ZW31 735 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 MCEEQ96PE7 176 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 MMTAG2Q9BU76 263 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 COQ9O75208 318 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 CAPN15O75808 1086 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 LCA5LO95447 670 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SGPL1O95470 568 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 CBX6O95503 412 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ITGB3P05106 788 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ZNF286BP0CG31 522 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ETS2P15036 469 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ERFP50548 548 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SNX17Q15036 470 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 OLFML1Q6UWY5 402 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 TMC7Q7Z402 723 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 DHX38Q92620 1227 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 HAUS8Q9BT25 410 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 MSCO60682 206 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 VTNP04004 478 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 HMBSP08397 361 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 RGS7P49802 495 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 LAMTOR4Q0VGL1 99 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 AP1B1Q10567 949 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 LIN52Q52LA3 116 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 C17orf50Q8WW18 174 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 VPS39Q96JC1 886 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 POP1Q99575 1024 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 BTBD10Q9BSF8 475 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SAR1AQ9NR31 198 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 TBC1D23Q9NUY8 699 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 PI4K2BG5E9Z4 385 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 PPP1R11O60927 126 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 CYP11B1P15538 503 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 PCYT1AP49585 367 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ROR1Q01973 937 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 AUHQ13825 339 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 DNAL1Q4LDG9 190 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 HEATR6Q6AI08 1181 aaKnown RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
COPA-201ENST00000241704 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 MTBPQ96DY7 904 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 OSMRQ99650 979 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 HSD17B14Q9BPX1 270 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms