RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FIZ1Q96SL8 496 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 EIF2AK1Q9BQI3 630 aaKnown RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 DHRS4Q9BTZ2 278 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 NFKBIZQ9BYH8 718 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 ADAMTS10Q9H324 1103 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 RNPEPQ9H4A4 650 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 DHX33Q9H6R0 707 aaKnown RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 RC3H2Q9HBD1 1191 aaKnown RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 QPCTLQ9NXS2 382 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 ZMAT5Q9UDW3 170 aaKnown RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 RCOR1Q9UKL0 485 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 ZMYND8Q9ULU4 1186 aaPredicted RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 SRPRBQ9Y5M8 271 aaKnown RBP3.85□□□□□ -1.79
UFM1-201ENST00000239878 CLIC4Q9Y696 253 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 USH1CQ9Y6N9 552 aa3.85□□□□□ -1.79
UFM1-201ENST00000239878 MROH7Q68CQ1 1323 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 A0A1W2PQH9 124 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CTAGE15A4D2H0 777 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 GOLGA8KD6RF30 607 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 INPPL1O15357 1258 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCNT1O60563 726 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 MED24O75448 989 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 BMP15O95972 392 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 KRT14P02533 472 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CYP1A1P04798 512 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 LINC00271P0C7V0 271 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZNF286BP0CG31 522 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CTAGE8P0CG41 777 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TROVE2P10155 538 aaKnown RBP eCLIP3.84□□□□□ -1.79
UFM1-201ENST00000239878 COL6A2P12110 1019 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 MYCLP12524 364 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 RPA1P27694 616 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ID4P47928 161 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCNG1P51959 295 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZNF131P52739 623 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ERVK-21P61565 698 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SULT2A1Q06520 285 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 STRN3Q13033 797 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 MAPK7Q13164 816 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 GRB10Q13322 594 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 MTF1Q14872 753 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 BCL2A1Q16548 175 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CNPY1Q3B7I2 92 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SEZ6Q53EL9 994 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZC3H12BQ5HYM0 836 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 GKAP1Q5VSY0 366 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 RUFY4Q6ZNE9 571 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CTAGE6Q86UF2 777 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCNJLQ8IV13 435 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CTAGE4Q8IX94 777 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ESX1Q8N693 406 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 GDAP1Q8TB36 358 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCDC127Q96BQ5 260 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 AK8Q96MA6 479 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TRAPPC9Q96Q05 1148 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 GDF15Q99988 308 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SIKE1Q9BRV8 207 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZBED2Q9BTP6 218 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 KATNAL1Q9BW62 490 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TEKT3Q9BXF9 490 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 MAK16Q9BXY0 300 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCSER1Q9C0I3 900 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SENP6Q9GZR1 1112 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 MRPL46Q9H2W6 279 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 TPK1Q9H3S4 243 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TRIM39Q9HCM9 518 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 LZTFL1Q9NQ48 299 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 XPNPEP1Q9NQW7 623 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 BLOC1S4Q9NUP1 217 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CIDEBQ9UHD4 219 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 KIAA1257Q9ULG3 409 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 DMTF1Q9Y222 760 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 FAM50BQ9Y247 325 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CARD8Q9Y2G2 431 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TDRKHQ9Y2W6 561 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZNF711Q9Y462 761 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PCDHA2Q9Y5H9 948 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PCDHA10Q9Y5I2 948 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SQORQ9Y6N5 450 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SCN5AQ14524 2016 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 GBF1Q92538 1859 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 DNAH12Q6ZR08 3092 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 NRCAMQ92823 1304 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ABLIM1O14639 778 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 B3GALNT1O75752 331 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SLC12A3P55017 1021 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SOX10P56693 466 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 RTP1P59025 263 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 KCNJ2P63252 427 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 CLCQ05315 142 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PPIDQ08752 370 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 WASHC5Q12768 1159 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TBX2Q13207 712 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZNF268Q14587 947 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 TRIP4Q15650 581 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 CALCRLQ16602 461 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 TRIM60Q495X7 471 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 MSS51Q4VC12 460 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms