RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SOWAHAQ2M3V2 549 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 PPP1R15BQ5SWA1 713 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 AGMOQ6ZNB7 445 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 ADGRF2Q8IZF7 708 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 TMEM51Q9NW97 253 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 PRKAG3Q9UGI9 489 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 A8MXQ7 604 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 M0QYV0 167 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 PDE2AO00408 941 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GABRDO14764 452 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ZNF185O15231 689 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 CEP104O60308 925 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 MICAL2O94851 1124 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 PCSK1P29120 753 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GBP1P32455 592 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 MLH1P40692 756 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 RPL34P49207 117 aaKnown RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 PEX5P50542 639 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 CDH8P55286 799 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 COPS2P61201 443 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 BST2Q10589 180 aaKnown RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 PDCLQ13371 301 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 SMAD4Q13485 552 aaKnown RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 PKDCCQ504Y2 493 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 MAATS1Q7Z4T9 603 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ADHFE1Q8IWW8 467 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ANKRD52Q8NB46 1076 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 SMRP1Q8NCR6 262 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 CCDC26Q8TAB7 109 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 MCRS1Q96EZ8 462 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 HSFY1Q96LI6 401 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 GAD1Q99259 594 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 FAM129AQ9BZQ8 928 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 TLE6Q9H808 572 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
SLIRP-201ENST00000238688 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
SLIRP-201ENST00000238688 TSC2P49815 1807 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 NT5C1B-RDH14C9J2C7 533 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PODXLO00592 558 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 GPR37L1O60883 481 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 CYP11A1P05108 521 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 ODC1P11926 461 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TYMPP19971 482 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PTPN7P35236 360 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 NDUFV1P49821 464 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 BCAR1P56945 870 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
SLIRP-201ENST00000238688 UPP1Q16831 310 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
SLIRP-201ENST00000238688 C8orf74Q6P047 294 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TMEM184AQ6ZMB5 413 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PASD1Q8IV76 773 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 KATNAL2Q8IYT4 538 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 ABI1Q8IZP0 508 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 WDTC1Q8N5D0 677 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 OR6B3Q8NGW1 331 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 MICAL1Q8TDZ2 1067 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
SLIRP-201ENST00000238688 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 PPP2R3CQ969Q6 453 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 RBM41Q96IZ5 413 aaKnown RBP13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 HNRNPABQ99729 332 aaKnown RBP13.88□□□□□ -0.19
SLIRP-201ENST00000238688 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 NRDE2Q9H7Z3 1164 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 ANKZF1Q9H8Y5 726 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 ARFGAP3Q9NP61 516 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 SPG21Q9NZD8 308 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 KLK14Q9P0G3 267 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 EFR3BQ9Y2G0 817 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 TRIOO75962 3097 aa13.88□□□□□ -0.19
SLIRP-201ENST00000238688 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 CYB561D2O14569 222 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms